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Schema
Citing CMDGA
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Annotation type
1343
candidate regulatory elements
985
target gene predictions
767
histone modifications
747
chromatin state
717
binding sites
429
accessible chromatin
205
gene expression
124
eQTL
74
Fine-mapped variants
58
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
1
representative DNase hypersensitivity sites
Annotation Category
2
Genetic variant effects
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
primary cell
2
tissue
Biosample term
1
coronary artery
1
liver
Organ
1
artery
1
blood vessel
1
heart
1
liver
1
vasculature
Date released
1
February, 2023
1
May, 2022
Software used
2
rasqual
1
eigenmt
Lab
1
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
2
AMP
RFA
2
AMP
biosample_type!
primary cell
biosample_type!!
primary cell
Showing 2 of 2 results
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FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP