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Schema
Citing CMDGA
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Annotation type
11
accessible chromatin
10
candidate regulatory elements
8
chromatin state
8
gene expression
8
target gene predictions
6
Fine-mapped variants
6
binding sites
5
eQTL
5
histone modifications
4
variant allelic effects
2
caQTL
2
differential activity
Annotation Category
2
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
GRCh38
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
1
coronary artery
1
smooth muscle cell of the coronary artery
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
Date released
2
February, 2023
Software used
2
rasqual
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
files.file_type!
txt
month_released!
January, 2021
Showing 2 of 2 results
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FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP