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Schema
Citing CMDGA
Clear Filters
Annotation type
181
candidate regulatory elements
109
target gene predictions
99
chromatin state
62
accessible chromatin
43
gene expression
26
binding sites
26
histone modifications
20
eQTL
15
Fine-mapped variants
15
variant allelic effects
7
differential activity
5
caQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
3
snATAC-seq
2
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
1
coronary artery
1
liver
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
Date released
2
February, 2023
2
October, 2022
1
May, 2022
Software used
5
rasqual
3
eigenmt
Lab
2
AMP-T2D consortium
2
Stephen Parker, UMich
1
Karen Mohlke, UNC
Project
5
AMP
RFA
3
AMP
2
AMP2
Showing 5 of 5 results
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FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP