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Schema
Citing CMDGA
Clear Filters
Annotation type
195
candidate regulatory elements
153
target gene predictions
112
chromatin state
67
binding sites
59
accessible chromatin
38
histone modifications
28
gene expression
12
differential activity
12
variant allelic effects
11
eQTL
9
Fine-mapped variants
3
caQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
1
coronary artery
1
fibroblast of the aortic adventitia
1
smooth muscle cell of the coronary artery
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
0
blood
0
intestine
Date released
3
February, 2023
Software used
3
rasqual
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
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FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP