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Schema
Citing CMDGA
Clear Filters
Annotation type
262
candidate regulatory elements
182
target gene predictions
149
chromatin state
141
accessible chromatin
85
gene expression
51
binding sites
37
histone modifications
34
eQTL
32
variant allelic effects
27
differential activity
21
Fine-mapped variants
6
caQTL
2
pQTL
Annotation Category
6
Genetic variant effects
Annotation type Category
5
snATAC-seq
1
ATAC-seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Biosample term
1
coronary artery
1
fibroblast of the aortic adventitia
1
mesenchymal stem cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
0
nose
Date released
3
February, 2023
3
October, 2022
Software used
6
rasqual
3
eigenmt
Lab
3
AMP-T2D consortium
3
Stephen Parker, UMich
Project
6
AMP
RFA
3
AMP
3
AMP2
Showing 6 of 6 results
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FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP