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Annotation type
253
gene expression
213
accessible chromatin
122
target gene predictions
109
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
4
eQTL
3
caQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
3
snATAC-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
endothelial cell
Organ
6
musculature of body
3
blood vessel
3
connective tissue
3
epithelium
3
vasculature
2
artery
2
heart
1
liver
Life stage
1
adult
Date released
1
February, 2023
1
July, 2025
1
October, 2022
Software used
2
rasqual
1
eigenmt
1
qTLtools
Lab
2
Stephen Parker, UMich
1
AMP-T2D consortium
Project
3
AMP
Collection Tags
1
T2DKP
1
CMDGA
1
DGA
RFA
2
AMP2
1
AMP
Showing 3 of 3 results
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FileSet
DSR726WRZ
released
Annotation file set
: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - endothelial cell
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP