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Schema
Citing CMDGA
Clear Filters
Annotation type
7
gene expression
4
candidate regulatory elements
4
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
19
heart
19
stomach
18
A549
16
brain
16
lung
16
muscle of arm
15
small intestine
14
adrenal gland
14
kidney
14
placenta
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
10
right kidney
9
left kidney
9
renal cortex interstitium
9
renal pelvis
7
liver
7
spinal cord
6
K562
6
adipose tissue
6
spleen
5
MCF-7
5
heart left ventricle
5
sigmoid colon
4
body of pancreas
4
chorionic villus
4
endocrine pancreas
4
gastrocnemius medialis
4
muscle of trunk
4
neural progenitor cell
4
ovary
4
psoas muscle
4
thyroid gland
4
transverse colon
3
HeLa-S3
3
Peyer's patch
3
caudate nucleus
3
chorion membrane
3
endometrium adenocarcinoma
3
heart right ventricle
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
retina
3
skeletal muscle tissue
3
testis
3
tibial nerve
3
upper lobe of left lung
2
22Rv1
2
Brodmann (1909) area 46
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipocyte
2
angular gyrus
2
aorta
2
ascending aorta
2
breast epithelium
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
duodenal mucosa
2
endodermal cell
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
frontal cortex
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mesenchymal stem cell
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
omental fat pad
2
pancreas
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM18507
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H1-hESC
1
H4
1
H54
1
H7-hESC
1
H9
1
HAP-1
1
HCT116
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HepG2
1
HuH-7
1
HuH-7.5
1
IMR-90
1
KARPAS-422 cell
1
KBM-7
1
KMS-11
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LoVo cell
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226 cell
1
NCI-H460 cell
1
NCI-H929
1
NT2-D1 cell
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
PC-9
1
Panc1
1
RCC 7860
1
RPMI7951
1
RPMI8226
Life stage
4
embryonic
Date released
4
September, 2022
Software used
4
r
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
binding sites
biosample_type!
primary cell
Showing 4 of 4 results
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Download
FileSet
DSR114CAK
released
Annotation file set
: Candidate regulatory elements for BSS01372 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR794AQT
released
Annotation file set
: Candidate regulatory elements for BSS01371 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR064BJU
released
Annotation file set
: Candidate regulatory elements for BSS01370 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR913FYZ
released
Annotation file set
: Candidate regulatory elements for BSS00272 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP