Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
54
common myeloid progenitor, CD34-positive
32
B cell
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
22
CD8-positive, alpha-beta memory T cell
19
foreskin keratinocyte
19
mononuclear cell
16
trophoblast cell
15
endothelial cell of umbilical vein
14
CD4-positive, alpha-beta T cell
14
fibroblast of lung
14
natural killer cell
13
CD8-positive, alpha-beta T cell
13
neurosphere
12
T cell
12
T-helper 1 cell
12
pericyte cell
12
regulatory T cell
11
T-helper 17 cell
11
T-helper 2 cell
11
fibroblast of dermis
11
keratinocyte
10
dermis blood vessel endothelial cell
10
fibroblast of cardiac tissue
10
mammary gland epithelial cell
9
epithelial cell of prostate
9
foreskin fibroblast
9
naive T cell
9
neutrophil
9
skeletal muscle myoblast
8
bronchial epithelial cell
8
fibroblast of breast
8
myoepithelial cell of mammary gland
7
astrocyte
7
endothelial cell
7
kidney tubule cell
7
mature neutrophil
7
skin fibroblast
6
T-cell
6
dermis lymphatic vessel endothelial cell
6
foreskin melanocyte
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
olfactory receptor cell
6
skeletal muscle satellite cell
6
smooth muscle cell
5
CD14-positive, CD16-negative classical monocyte
5
alternatively activated macrophage
5
hepatocyte
5
luminal epithelial cell of mammary gland
5
lung microvascular endothelial cell
5
mammary epithelial cell
5
osteoblast
4
CD1c-positive myeloid dendritic cell
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
astrocyte of the spinal cord
4
brain microvascular endothelial cell
4
choroid plexus epithelial cell
4
epithelial cell of esophagus
4
epithelial cell of proximal tubule
4
erythroblast
4
fibroblast
4
fibroblast of gingiva
4
fibroblast of mammary gland
4
fibroblast of peridontal ligament
4
fibroblast of pulmonary artery
4
fibroblast of the aortic adventitia
4
fibroblast of the conjunctiva
4
fibroblast of villous mesenchyme
4
glomerular endothelial cell
4
glomerular visceral epithelial cell
4
inflammatory macrophage
4
iris pigment epithelial cell
4
kidney epithelial cell
4
kidney glomerular epithelial cell
4
non-pigmented ciliary epithelial cell
4
pancreatic delta cell
4
peripheral blood mononuclear cell
4
pulmonary artery endothelial cell
4
renal cortical epithelial cell
4
retinal pigment epithelial cell
4
skeletal muscle cell
4
smooth muscle cell of the brain vasculature
4
stromal cell of bone marrow
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
cardiac fibroblast
3
cardiac muscle cell
3
colon epithelial cell
3
epidermal melanocyte
3
epithelial cell of amnion
3
hepatic stellate cell
3
kidney capillary endothelial cell
3
macrophage
3
mammary stem cell
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
regular cardiac myocyte
3
type B pancreatic cell
2
CD4-positive helper T cell
2
activated CD4-positive, alpha-beta T cell
2
blood vessel smooth muscle cell
2
cortical cell of adrenal gland
2
dermis microvascular lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
gabaergic neuron
2
glutamatergic neuron
2
megakaryocyte
2
memory B cell
2
mesenchymal stem cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
smooth muscle cell of the esophagus
2
type II pneumocyte
1
B cell, CD19-positive
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alveolar macrophage
1
amniotic epithelial cell
1
basal cell
1
basal cell of epidermis
1
brain pericyte
1
cardiac endothelial cell
1
cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
conventional dendritic cell
1
eccrine cell
1
effector memory CD4-positive, alpha-beta T cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
fat cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
foveolar cell of stomach
1
granular cell of epidermis
1
intestinal tuft cell
1
luteal cell
1
mast cell
1
mature NK T cell
1
mature eosinophil
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
mesothelial cell
1
microglial cell
1
myoepithelial cell
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
plasma cell
1
plasmacytoid dendritic cell
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
schwann cell
1
skeletal muscle fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
Organ
4
artery
4
blood vessel
4
connective tissue
4
vasculature
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
stellate neuron
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR253WXO
released
Annotation file set
: Candidate regulatory elements for BSS00345 fibroblast of pulmonary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR241ANB
released
Annotation file set
: Target gene predictions for BSS00345 fibroblast of pulmonary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860ZEJ
released
Annotation file set
: Chromatin states for BSS00345 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365SOB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of pulmonary artery
Lab:
AMP-T2D consortium
Project:
AMP