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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
2
accessible chromatin
2
target gene predictions
1
candidate regulatory elements
1
chromatin state
1
eQTL
1
gene expression
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
36
A549
26
common myeloid progenitor, CD34-positive
20
hematopoietic multipotent progenitor cell
18
CD4-positive, alpha-beta memory T cell
17
B cell
14
CD8-positive, alpha-beta memory T cell
13
K562
12
adipose tissue
12
adrenal gland
12
liver
12
mononuclear cell
12
stomach
10
MCF-7
10
sigmoid colon
10
spleen
9
heart left ventricle
8
CD14-positive monocyte
8
T cell
8
adipocyte
8
body of pancreas
8
endocrine pancreas
8
foreskin keratinocyte
8
gastrocnemius medialis
8
psoas muscle
8
thyroid gland
8
transverse colon
7
caudate nucleus
7
endothelial cell of umbilical vein
7
fibroblast of lung
7
layer of hippocampus
7
mature neutrophil
7
temporal lobe
7
tibial nerve
6
HeLa-S3
6
Peyer's patch
6
T-helper 1 cell
6
T-helper 17 cell
6
T-helper 2 cell
6
angular gyrus
6
aorta
6
endometrium adenocarcinoma
6
fibroblast of dermis
6
heart right ventricle
6
immortal human breast epithelial cell line cell
6
mammary gland epithelial cell
6
naive T cell
6
natural killer cell
6
ovary
6
regulatory T cell
6
skeletal muscle tissue
6
small intestine
6
upper lobe of left lung
5
CD14-positive, CD16-negative classical monocyte
5
ascending aorta
5
cingulate gyrus
5
colonic mucosa
5
coronary artery
5
duodenal mucosa
5
embryonic stem cell
5
heart
5
keratinocyte
5
kidney
5
left cardiac atrium
5
mucosa of rectum
5
pancreas
5
skeletal muscle myoblast
5
stomach smooth muscle
5
substantia nigra
5
thoracic aorta
5
tibial artery
4
22Rv1
4
Brodmann (1909) area 46
4
LNCaP clone FGC
4
NAMALWA cell
4
SK-N-DZ
4
SK-N-SH
4
T47D
4
alternatively activated macrophage
4
breast epithelium
4
bronchial epithelial cell
4
cerebellum
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
epithelial cell of prostate
4
esophagus
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
fibroblast of breast
4
fibroblast of cardiac tissue
4
foreskin fibroblast
4
frontal cortex
4
kidney tubule cell
4
lower leg skin
4
lung
4
muscle cell
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
neutrophil
4
omental fat pad
4
parathyroid adenoma
4
prostate gland
4
right atrium auricular region
4
right cardiac atrium
4
testis
4
vagina
3
CD4-positive, alpha-beta T cell
3
GM12878
3
HepG2
3
KARPAS-422 cell
3
inflammatory macrophage
3
islet of Langerhans
3
mesenchymal stem cell
3
rectum smooth muscle tissue
3
skeletal muscle satellite cell
2
8988T
2
A172
2
A673
2
ACC112
2
ACHN
2
AG08395 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
AG20443
2
Ammon's horn
2
BE(2)-C
2
BJ cell
2
C4-2B
2
CD1c-positive myeloid dendritic cell
2
CMK
2
COLO829
2
CWRU1
2
Caco-2 cell
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELR
2
ESC derived cell line
2
G401
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HK-2 cell
2
HL-60
2
HPDE6-E6E7
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HuH-7
2
HuH-7.5
2
KBM-7
2
KMS-11
2
KOPT-K1
2
L1-S8
2
L1-S8R
2
LHCN-M2
2
LoVo cell
2
Loucy
2
M059J
2
MG63
2
MM.1S
2
NB4
2
NCI-H226 cell
2
NCI-H460 cell
2
NCI-H929
2
NT2-D1 cell
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
PC-9
2
Panc1
2
RCC 7860
2
RPMI7951
2
RPMI8226
Organ
2
brain
Life stage
2
adult
Date released
2
September, 2022
February, 2021
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
February, 2021
relevant_life_stage!
embryonic
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR918KWB
released
Annotation file set
: Candidate regulatory elements for BSS00071 Ammon's horn from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR487MIE
released
Annotation file set
: Chromatin states for BSS00071 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP