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Schema
Citing CMDGA
Clear Filters
Annotation type
18
histone modifications
5
accessible chromatin
5
target gene predictions
2
gene expression
1
candidate regulatory elements
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
56
heart
49
muscle of arm
47
brain
45
lung
43
stomach
42
muscle of leg
41
muscle of back
40
large intestine
40
placenta
39
left lung
38
kidney
38
small intestine
33
right lung
31
thymus
30
right kidney
29
renal cortex interstitium
28
renal pelvis
27
left kidney
24
adrenal gland
21
spinal cord
17
CD4-positive, alpha-beta memory T cell
15
foreskin keratinocyte
14
trophoblast cell
12
chorionic villus
12
muscle of trunk
11
endothelial cell of umbilical vein
11
heart left ventricle
10
common myeloid progenitor, CD34-positive
10
neurosphere
9
neural progenitor cell
9
retina
8
T-helper 17 cell
8
heart right ventricle
8
left cardiac atrium
8
left renal cortex interstitium
8
left renal pelvis
8
liver
8
right renal pelvis
7
adipocyte
7
cardiac muscle cell
7
foreskin fibroblast
7
right renal cortex interstitium
6
bronchial epithelial cell
6
chorion membrane
6
endodermal cell
6
epithelial cell of prostate
6
eye
6
fibroblast of lung
6
keratinocyte
6
neutrophil
6
spleen
6
tongue
6
trophoblast
5
B cell
5
CD8-positive, alpha-beta memory T cell
5
embryonic stem cell
5
foreskin melanocyte
5
hepatocyte
5
limb
5
mesodermal cell
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
germinal matrix
4
lung microvascular endothelial cell
4
neural cell
4
skeletal muscle myoblast
4
skin fibroblast
4
testis
3
CD14-positive monocyte
3
CD14-positive, CD16-negative classical monocyte
3
CD1c-positive myeloid dendritic cell
3
CD4-positive, alpha-beta T cell
3
T-helper 1 cell
3
T-helper 2 cell
3
amnion
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
ectodermal cell
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
femur
3
fibroblast of gingiva
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
hematopoietic multipotent progenitor cell
3
iris pigment epithelial cell
3
islet of Langerhans
3
islet precursor cell
3
kidney epithelial cell
3
mesenchymal stem cell
3
mesendoderm
3
mononuclear cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neuron
3
non-pigmented ciliary epithelial cell
3
osteoblast
3
ovary
3
psoas muscle
3
pulmonary artery endothelial cell
3
regulatory T cell
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
sigmoid colon
3
skeletal muscle cell
3
skeletal muscle tissue
3
smooth muscle cell
3
smooth muscle cell of the brain vasculature
3
stromal cell of bone marrow
3
umbilical cord
2
CD8-positive, alpha-beta T cell
2
T cell
2
T-cell
2
alternatively activated macrophage
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
arm bone
2
cardiac fibroblast
2
cardiac mesoderm primordium
2
cardiac myoblast
2
cardiovascular progenitor cell
2
chorion
2
dermis microvascular lymphatic vessel endothelial cell
2
embryonic facial prominence
2
endocrine pancreas
2
epidermal melanocyte
epithelial cell of amnion
2
erythroblast
2
germinal center
2
kidney capillary endothelial cell
2
leg bone
2
mammary epithelial cell
2
mammary gland epithelial cell
2
mature neutrophil
2
naive T cell
2
neuroepithelial stem cell
2
neuronal stem cell
2
pericyte cell
2
placental basal plate
2
regular cardiac myocyte
2
skin of body
2
urinary bladder
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
H1-hESC
1
amniotic epithelial cell
1
brain pericyte
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
ecto neural progenitor cell
1
effector memory CD4-positive, alpha-beta T cell
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
forelimb muscle
1
hindlimb muscle
1
layer of hippocampus
1
left leg bone
1
mid-frontal lobe
1
mid-neurogenesis radial glial cells
1
mucosa of rectum
1
myotube
1
pancreas
1
radial glial cell
1
rectum smooth muscle tissue
1
right arm bone
1
skeletal muscle
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
Life stage
adult
1
child
1
unknown
Date released
1
February, 2021
1
May, 2022
Software used
1
chromhmm
1
encode-ccres
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
epithelial cell of amnion
biosample_type!
cell line
relevant_life_stage!
adult
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR271DAI
released
Annotation file set
: Chromatin state of CD8-positive, alpha-beta T cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR522PDA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE CD8-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP