Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
40
target gene predictions
8
gene expression
3
candidate regulatory elements
2
binding sites
2
chromatin state
1
accessible chromatin
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
2
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
59
stomach
58
heart
49
lung
49
muscle of arm
47
brain
45
kidney
44
small intestine
42
adrenal gland
42
muscle of leg
41
muscle of back
40
common myeloid progenitor, CD34-positive
40
large intestine
40
placenta
39
A549
39
left lung
33
right lung
31
thymus
30
right kidney
29
hematopoietic multipotent progenitor cell
29
renal cortex interstitium
28
renal pelvis
27
left kidney
25
B cell
23
CD4-positive, alpha-beta memory T cell
21
spinal cord
21
spleen
20
liver
19
heart left ventricle
15
CD8-positive, alpha-beta memory T cell
15
foreskin keratinocyte
15
sigmoid colon
14
MCF-7
14
trophoblast cell
13
K562
13
adipose tissue
13
mononuclear cell
12
CD14-positive monocyte
12
body of pancreas
12
chorionic villus
12
gastrocnemius medialis
12
muscle of trunk
12
natural killer cell
12
ovary
12
thyroid gland
12
transverse colon
11
CD4-positive, alpha-beta T cell
11
endocrine pancreas
11
heart right ventricle
11
psoas muscle
10
Peyer's patch
10
endothelial cell of umbilical vein
10
neurosphere
10
testis
10
tibial nerve
10
upper lobe of left lung
9
T-helper 1 cell
9
fibroblast of lung
9
foreskin fibroblast
9
layer of hippocampus
9
neural progenitor cell
9
retina
9
skeletal muscle tissue
9
temporal lobe
8
CD8-positive, alpha-beta T cell
8
H9
8
HeLa-S3
8
T cell
T-helper 17 cell
8
T-helper 2 cell
8
adipocyte
8
angular gyrus
8
aorta
8
caudate nucleus
8
dermis blood vessel endothelial cell
8
esophagus squamous epithelium
8
left cardiac atrium
8
left renal cortex interstitium
8
left renal pelvis
8
lower leg skin
8
regulatory T cell
8
right renal pelvis
7
ascending aorta
7
breast epithelium
7
cardiac muscle cell
7
esophagus muscularis mucosa
7
fibroblast of dermis
7
mature neutrophil
7
mesenchymal stem cell
7
omental fat pad
7
pancreas
7
parathyroid adenoma
7
right renal cortex interstitium
7
substantia nigra
7
thoracic aorta
6
22Rv1
6
SK-N-DZ
6
SK-N-SH
6
WI38
6
bronchial epithelial cell
6
chorion membrane
6
cingulate gyrus
6
colonic mucosa
6
coronary artery
6
duodenal mucosa
6
endodermal cell
6
endometrium adenocarcinoma
6
epithelial cell of prostate
6
esophagus
6
eye
6
fibroblast of breast
6
fibroblast of cardiac tissue
6
gastroesophageal sphincter
6
hepatocyte
6
immortal human breast epithelial cell line cell
6
mammary gland epithelial cell
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
prostate gland
6
skeletal muscle myoblast
6
stomach smooth muscle
6
tibial artery
6
tongue
6
trophoblast
6
vagina
5
CD14-positive, CD16-negative classical monocyte
5
LNCaP clone FGC
5
T47D
5
cerebellum
5
embryonic stem cell
5
foreskin melanocyte
5
keratinocyte
5
kidney tubule cell
5
limb
5
mesodermal cell
5
right atrium auricular region
5
right cardiac atrium
5
smooth muscle cell
5
subcutaneous abdominal adipose tissue
5
urinary bladder
4
Brodmann (1909) area 46
4
HEK293
4
NAMALWA cell
4
T-cell
4
alternatively activated macrophage
4
dermis lymphatic vessel endothelial cell
4
frontal cortex
4
germinal matrix
4
lung microvascular endothelial cell
4
muscle cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neural cell
4
neuronal stem cell
4
pericyte cell
4
peripheral blood mononuclear cell
4
skeletal muscle satellite cell
4
skin fibroblast
4
uterus
3
A172
3
A673
3
ACC112
3
ACHN
3
Ammon's horn
3
C4-2B
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Caki2
3
DND-41
3
DOHH2
3
Daoy
3
EH
3
EL
3
ELF-1
3
ELR
3
G401
3
GM04503
3
GM04504
3
GM06990
3
GM08714
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM23248
3
GM23338
3
H4
3
H54
3
HAP-1
3
HCT116
3
HL-60
3
HS-27A
3
HS-5
3
HT-29
3
HT1080
3
HUES48
Organ
5
embryo
Life stage
5
embryonic
Date released
4
September, 2022
August, 2017
1
February, 2021
Software used
2
chromhmm
2
r
1
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
T-helper 17 cell
month_released!
August, 2017
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR440MAB
released
Annotation file set
: Candidate regulatory elements for BSS00715 HUES48 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134GHD
released
Annotation file set
: Chromatin states for BSS00715 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR510EDL
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HUES48
Lab:
AMP-T2D consortium
Project:
AMP