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Schema
Citing CMDGA
Clear Filters
Annotation type
5
histone modifications
3
binding sites
3
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
2
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
22
liver
5
hepatocyte
4
HepG2
3
right lobe of liver
2
HuH-7
2
HuH-7.5
2
hepatic stellate cell
Disease term
2
hepatocellular carcinoma
Organ
4
liver
Life stage
2
child
1
young adult
Date released
2
September, 2022
1
August, 2017
1
February, 2021
Software used
2
chromhmm
1
encode-ccres
1
r
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
biosample_term_name!
GM06990
Showing 4 of 4 results
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Download
FileSet
DSR473QIA
released
Annotation file set
: Candidate regulatory elements for BSS00558 HepG2 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR533TVB
released
Annotation file set
: Chromatin states for BSS00558 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR707QFW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HepG2
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR035696
released
Annotation file set
: ChromHMM 13-state model for Hepatocellular Carcinoma Cell Line
Lab:
Stephen Parker, UMich
Project:
AMP