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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
caQTL
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
40
common myeloid progenitor, CD34-positive
25
B cell
23
CD4-positive, alpha-beta memory T cell
15
CD8-positive, alpha-beta memory T cell
15
foreskin keratinocyte
13
mononuclear cell
12
CD14-positive monocyte
12
natural killer cell
11
CD4-positive, alpha-beta T cell
11
endothelial cell of umbilical vein
11
trophoblast cell
10
fibroblast of lung
10
neurosphere
9
T-helper 1 cell
8
CD8-positive, alpha-beta T cell
8
T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
dermis blood vessel endothelial cell
8
regulatory T cell
7
fibroblast of dermis
7
foreskin fibroblast
7
mature neutrophil
7
skeletal muscle myoblast
6
bronchial epithelial cell
6
epithelial cell of prostate
6
fibroblast of breast
6
fibroblast of cardiac tissue
6
keratinocyte
6
mammary gland epithelial cell
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
5
CD14-positive, CD16-negative classical monocyte
5
foreskin melanocyte
5
kidney tubule cell
4
T-cell
4
alternatively activated macrophage
4
dermis lymphatic vessel endothelial cell
4
lung microvascular endothelial cell
4
mammary epithelial cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
pericyte cell
4
peripheral blood mononuclear cell
4
skeletal muscle satellite cell
4
skin fibroblast
3
CD1c-positive myeloid dendritic cell
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
brain microvascular endothelial cell
3
cardiac fibroblast
3
choroid plexus epithelial cell
3
endothelial cell
3
endothelial cell of lymphatic vessel
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
fibroblast
3
fibroblast of gingiva
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
hepatic stellate cell
3
hepatocyte
3
inflammatory macrophage
3
iris pigment epithelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
macrophage
3
mast cell
3
non-pigmented ciliary epithelial cell
3
osteoblast
3
pulmonary artery endothelial cell
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
3
stromal cell of bone marrow
2
adipocyte
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
cardiac muscle cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endocardial cell
2
epidermal melanocyte
2
epithelial cell of amnion
2
erythroblast
2
kidney capillary endothelial cell
2
luminal epithelial cell of mammary gland
2
mammary stem cell
2
mesenchymal stem cell
2
neuronal stem cell
2
regular cardiac myocyte
2
regular ventricular cardiac myocyte
2
smooth muscle cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
amniotic epithelial cell
1
brain pericyte
1
cholangiocyte
1
dendritic cell
1
effector memory CD4-positive, alpha-beta T cell
1
erythrocyte
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
mature eosinophil
1
myofibroblast cell
Organ
3
blood vessel
3
connective tissue
3
vasculature
Life stage
3
unknown
Date released
2
September, 2022
1
February, 2021
Software used
1
chromhmm
1
encode-ccres
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
tissue
Showing 3 of 3 results
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Download
FileSet
DSR902WKL
released
Annotation file set
: Candidate regulatory elements for BSS00347 fibroblast of the aortic adventitia from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR159VQB
released
Annotation file set
: Chromatin states for BSS00347 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761GFE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of the aortic adventitia
Lab:
AMP-T2D consortium
Project:
AMP