Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
eQTL
1
gene expression
1
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
40
common myeloid progenitor, CD34-positive
39
A549
29
hematopoietic multipotent progenitor cell
23
CD4-positive, alpha-beta memory T cell
22
B cell
19
stomach
18
adrenal gland
18
spleen
16
liver
15
CD8-positive, alpha-beta memory T cell
15
foreskin keratinocyte
15
sigmoid colon
14
MCF-7
13
K562
13
adipose tissue
13
heart left ventricle
13
mononuclear cell
12
CD14-positive monocyte
12
body of pancreas
12
gastrocnemius medialis
12
thyroid gland
12
transverse colon
11
CD4-positive, alpha-beta T cell
11
endocrine pancreas
11
psoas muscle
10
Peyer's patch
10
endothelial cell of umbilical vein
10
tibial nerve
10
upper lobe of left lung
9
T-helper 1 cell
9
fibroblast of lung
9
foreskin fibroblast
9
layer of hippocampus
9
natural killer cell
9
ovary
9
skeletal muscle tissue
9
small intestine
9
temporal lobe
8
CD8-positive, alpha-beta T cell
8
HeLa-S3
8
T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
angular gyrus
8
aorta
8
caudate nucleus
8
dermis blood vessel endothelial cell
8
esophagus squamous epithelium
8
heart right ventricle
8
lower leg skin
8
pancreas
8
regulatory T cell
7
ascending aorta
7
breast epithelium
7
esophagus muscularis mucosa
7
fibroblast of dermis
7
kidney
7
lung
7
mature neutrophil
7
omental fat pad
7
parathyroid adenoma
7
substantia nigra
7
thoracic aorta
6
22Rv1
6
SK-N-DZ
6
SK-N-SH
6
WI38
6
adipocyte
6
bronchial epithelial cell
6
cingulate gyrus
6
colonic mucosa
6
coronary artery
6
duodenal mucosa
6
endometrium adenocarcinoma
6
epithelial cell of prostate
6
esophagus
6
fibroblast of breast
6
gastroesophageal sphincter
6
heart
6
immortal human breast epithelial cell line cell
6
mammary gland epithelial cell
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
prostate gland
6
skeletal muscle myoblast
6
stomach smooth muscle
6
subcutaneous abdominal adipose tissue
6
testis
6
tibial artery
6
vagina
5
CD14-positive, CD16-negative classical monocyte
5
LNCaP clone FGC
5
T47D
5
cerebellum
5
embryonic stem cell
5
foreskin melanocyte
5
keratinocyte
5
kidney tubule cell
5
right atrium auricular region
5
right cardiac atrium
4
Brodmann (1909) area 46
4
NAMALWA cell
4
T-cell
4
alternatively activated macrophage
4
dermis lymphatic vessel endothelial cell
4
fibroblast of cardiac tissue
4
frontal cortex
4
lung microvascular endothelial cell
4
mesenchymal stem cell
4
muscle cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
peripheral blood mononuclear cell
4
skeletal muscle satellite cell
4
uterus
3
A172
3
A673
3
ACC112
3
ACHN
3
Ammon's horn
3
C4-2B
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Caki2
3
DND-41
3
DOHH2
3
Daoy
3
EH
3
EL
3
ELR
3
G401
3
GM04503
3
GM04504
3
GM06990
3
GM08714
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM23248
3
GM23338
3
H4
3
H54
3
HAP-1
3
HCT116
3
HL-60
3
HS-27A
3
HS-5
3
HT-29
3
HT1080
3
HepG2
3
KARPAS-422 cell
3
KBM-7
3
KMS-11
3
KOPT-K1
3
L1-S8
3
LHCN-M2
3
Loucy
3
M059J
3
MCF 10A
3
MG63
3
MM.1S
3
NB4
3
NCI-H929
3
OCI-LY1
3
OCI-LY3
3
OCI-LY7
3
PC-3
3
PC-9
3
Panc1
3
RCC 7860
3
RPMI7951
3
RPMI8226
3
RWPE1
3
RWPE2
3
SJCRH30
3
SJSA1
3
SK-MEL-5
3
SK-N-MC
3
SU-DHL-6
3
SW480
3
WERI-Rb-1
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
bipolar neuron
3
brain microvascular endothelial cell
3
cerebellar cortex
3
choroid plexus epithelial cell
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
fibroblast of gingiva
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
Organ
4
uterus
Life stage
4
adult
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
1
chromhmm
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
relevant_life_stage!
embryonic
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR903VBR
released
Annotation file set
: Candidate regulatory elements for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR590GOS
released
Annotation file set
: Chromatin states for BSS01884 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR196WYN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE uterus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR703DFT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE uterus
Lab:
AMP-T2D consortium
Project:
AMP