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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
Fine-mapped variants
3
chromatin state
2
target gene predictions
1
accessible chromatin
1
eQTL
1
gene expression
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
RNA-seq
Available data
4
bed bed3+
1
tsv
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
41
stomach
37
heart
34
lung
33
muscle of arm
31
brain
30
kidney
30
small intestine
29
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
27
placenta
26
left lung
22
right lung
21
A549
20
liver
20
renal cortex interstitium
20
right kidney
20
thymus
19
hematopoietic multipotent progenitor cell
19
renal pelvis
18
left kidney
17
B cell
16
spleen
15
spinal cord
14
CD4-positive, alpha-beta memory T cell
13
islet of Langerhans
12
heart left ventricle
11
adipose tissue
11
foreskin keratinocyte
10
macrophage
10
natural killer cell
10
sigmoid colon
9
MCF-7
9
body of pancreas
9
ovary
9
thyroid gland
9
transverse colon
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
skeletal muscle tissue
8
subcutaneous adipose tissue
8
substantia nigra
8
testis
8
tibial nerve
7
CD8-positive, alpha-beta T cell
7
H9
7
K562
7
Peyer's patch
7
T-helper 1 cell
7
caudate nucleus
7
endocrine pancreas
7
foreskin fibroblast
7
layer of hippocampus
7
mononuclear cell
7
neurosphere
7
omental fat pad
7
psoas muscle
7
regulatory T cell
7
retina
7
upper lobe of left lung
6
T cell
6
T-helper 17 cell
6
T-helper 2 cell
6
adipocyte
6
cardiac muscle cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus muscularis mucosa
6
esophagus squamous epithelium
6
fibroblast of lung
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
lymphoblastoid cell line
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neutrophil
6
pancreas
6
right renal pelvis
5
HeLa-S3
5
WI38
5
ascending aorta
5
breast epithelium
5
cerebellum
5
coronary artery
5
esophagus
5
fibroblast
5
gastroesophageal sphincter
5
mesenchymal stem cell
5
neural progenitor cell
5
parathyroid adenoma
5
prostate gland
5
putamen
5
right atrium auricular region
5
right renal cortex interstitium
5
smooth muscle cell
5
subcutaneous abdominal adipose tissue
5
temporal lobe
5
tibial artery
5
vagina
4
22Rv1
4
SK-N-DZ
4
SK-N-SH
4
T-cell
4
angular gyrus
4
aorta
4
bronchial epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
endothelial cell
4
epithelial cell of prostate
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
frontal cortex
4
hepatocyte
4
mesodermal cell
4
monocyte
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
neuronal stem cell
4
peripheral blood mononuclear cell
4
skeletal muscle myoblast
4
skin of body
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
uterus
3
Ammon's horn
3
HEK293
3
LNCaP clone FGC
3
MCF 10A
3
T47D
3
blood cell
3
cardiac fibroblast
3
chorion membrane
3
endometrium adenocarcinoma
3
endothelial cell of lymphatic vessel
3
fibroblast of cardiac tissue
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney tubule cell
3
limb
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
3
mast cell
3
naive T cell
3
neural cell
3
pericyte cell
3
right lobe of liver
3
suprapubic skin
3
urinary bladder
2
A172
2
A673
2
ACC112
2
ACHN
2
AG10803
2
Brodmann (1909) area 46
2
C4-2B
2
CD1c-positive myeloid dendritic cell
2
CMK
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
Organ
5
blood vessel
5
vasculature
Life stage
5
adult
Date released
2
February, 2021
2
September, 2022
1
February, 2020
Software used
2
encode-ccres
2
r
1
gtex_eqtl:V8
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
frontal cortex
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR014GGP
released
Annotation file set
: Candidate regulatory elements for BSS00088 ascending aorta from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR105GFZ
released
Annotation file set
: Candidate regulatory elements for BSS00087 ascending aorta from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR229UIC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE ascending aorta
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR562VOB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE ascending aorta
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR511FNT
released
Annotation file set
: eQTL of ascending aorta for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP