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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
chromatin state
3
target gene predictions
2
accessible chromatin
2
binding sites
1
gene expression
1
histone modifications
1
variant allelic effects
0
eQTL
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
41
stomach
37
heart
34
lung
33
muscle of arm
31
brain
30
kidney
30
small intestine
29
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
27
placenta
26
left lung
22
right lung
20
renal cortex interstitium
20
right kidney
20
thymus
19
hematopoietic multipotent progenitor cell
19
liver
19
renal pelvis
18
left kidney
16
spleen
15
spinal cord
14
B cell
14
CD4-positive, alpha-beta memory T cell
13
islet of Langerhans
12
heart left ventricle
11
adipose tissue
11
foreskin keratinocyte
10
sigmoid colon
9
body of pancreas
9
ovary
9
thyroid gland
9
transverse colon
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
skeletal muscle tissue
8
subcutaneous adipose tissue
8
substantia nigra
8
testis
8
tibial nerve
7
CD8-positive, alpha-beta T cell
7
Peyer's patch
7
T-helper 1 cell
7
caudate nucleus
7
endocrine pancreas
7
layer of hippocampus
7
macrophage
7
mononuclear cell
7
natural killer cell
7
neurosphere
7
omental fat pad
7
psoas muscle
7
regulatory T cell
7
retina
7
upper lobe of left lung
6
T cell
6
T-helper 17 cell
6
T-helper 2 cell
6
cardiac muscle cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus muscularis mucosa
6
esophagus squamous epithelium
6
fibroblast of lung
6
foreskin fibroblast
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neutrophil
6
pancreas
6
right renal pelvis
5
ascending aorta
5
breast epithelium
5
cerebellum
5
coronary artery
5
esophagus
5
gastroesophageal sphincter
5
mesenchymal stem cell
5
neural progenitor cell
5
parathyroid adenoma
5
prostate gland
5
putamen
5
right atrium auricular region
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
temporal lobe
5
tibial artery
5
vagina
4
T-cell
4
adipocyte
4
angular gyrus
4
aorta
4
bronchial epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
epithelial cell of prostate
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
frontal cortex
4
mesodermal cell
4
monocyte
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
peripheral blood mononuclear cell
4
skeletal muscle myoblast
4
skin of body
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
uterus
3
Ammon's horn
3
blood cell
3
cardiac fibroblast
3
chorion membrane
3
fibroblast of cardiac tissue
3
hepatocyte
3
keratinocyte
3
kidney tubule cell
3
limb
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
3
naive T cell
3
neural cell
3
right lobe of liver
3
smooth muscle cell
3
suprapubic skin
3
urinary bladder
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
amnion
2
amygdala
2
anterior cingulate cortex
2
articular chondrocyte
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
bipolar neuron
2
blood
2
brain microvascular endothelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
cartilage tissue
2
cerebellar cortex
2
chorion
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
ectodermal cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
femur
2
fibroblast
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
germinal matrix
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hypothalamus
2
iris pigment epithelial cell
2
islet precursor cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
left cardiac atrium
2
mesendoderm
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of stomach
2
muscle cell
2
neuroepithelial stem cell
2
neuron
2
neuronal stem cell
2
non-pigmented ciliary epithelial cell
2
nucleus accumbens
2
osteoblast
2
placental basal plate
2
pulmonary artery endothelial cell
Life stage
2
adult
2
unknown
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_type!
cell line
software_used.software.name!
haploview
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR228ORW
released
Annotation file set
: Candidate regulatory elements for BSS01574 skeletal muscle myoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379XVE
released
Annotation file set
: Candidate regulatory elements for BSS01573 skeletal muscle myoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR252LYQ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR330AXB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP