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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
candidate regulatory elements
2
histone modifications
1
chromatin state
1
gene expression
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
19
primary cell
3
in vitro differentiated cells
Biosample term
20
hematopoietic multipotent progenitor cell
12
neural progenitor cell
11
cardiomyocytes
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
5
adipocyte
4
cardiac muscle cell
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
endodermal cell
4
mesodermal cell
3
hepatocyte(AFP)
3
mesenchymal stem cell
3
neural cell
3
pancreatic ductal cell
3
smooth muscle cell
2
bipolar neuron
2
cardiac myoblast
2
cardiovascular progenitor cell
2
ectodermal cell
2
hepatocyte
2
islet precursor cell
2
mesendoderm
2
muscle cell
2
neuroepithelial stem cell
2
neuron
2
neuronal stem cell
2
trophoblast cell
1
cardiac fibroblast
1
cardiac mesoderm primordium
1
cardiac muscle cell (pacemaker cell)
1
ecto neural progenitor cell
1
endothelial cell
1
excitatory neuron
1
hippocampal neuron
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
lower motor neuron
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
mid-neurogenesis radial glial cells
1
myocyte
1
myotube
1
olfactory neurosphere cell line
1
radial glial cell
1
stem cell
0
B cell
Life stage
2
embryonic
Date released
1
February, 2021
1
May, 2021
1
September, 2022
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR087ISF
released
Annotation file set
: Candidate regulatory elements for BSS01612 smooth muscle cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR656HJI
released
Annotation file set
: Gene expression annotation of smooth muscle cell_SMC ISL1-SMMHC+ on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR634BEA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE smooth muscle cell
Lab:
AMP-T2D consortium
Project:
AMP