Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
gene expression
0
candidate regulatory elements
Annotation Category
1
Gene expression levels
Annotation type Category
1
snRNA-seq
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
27
common myeloid progenitor, CD34-positive
21
A549
20
hematopoietic multipotent progenitor cell
18
epithelial cell of proximal tubule
16
B cell
16
glomerular endothelial cell
15
monocyte
14
CD4-positive, alpha-beta memory T cell
14
hepatocyte
14
spleen
14
stomach
13
T-helper 1 cell
13
adrenal gland
12
T-helper 17 cell
12
regulatory T cell
11
cardiomyocytes
11
foreskin keratinocyte
11
islet of Langerhans
11
kidney
11
liver
10
CD8-positive, alpha-beta T cell
10
adipose tissue
10
body of pancreas
10
endothelial cell
10
sigmoid colon
9
MCF-7
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
EndoC_BH1
8
H1-hESC
8
T-helper 2 cell
8
gastrocnemius medialis
8
heart left ventricle
8
natural killer cell
8
thyroid gland
8
tibial nerve
8
transverse colon
7
K562
7
Peyer's patch
7
endocrine pancreas
7
foreskin fibroblast
7
glomerular visceral epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mononuclear cell
7
neural progenitor cell
7
omental fat pad
7
ovary
7
psoas muscle
7
skeletal muscle tissue
7
subcutaneous adipose tissue
7
upper lobe of left lung
6
adipocyte
6
caudate nucleus
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
fibroblast of lung
6
kidney interstitial cell
6
layer of hippocampus
6
lower leg skin
6
lung
6
pancreatic ductal cell
6
small intestine
6
substantia nigra
6
temporal lobe
5
HeLa-S3
5
WI38
5
ascending aorta
5
breast epithelium
5
cerebellum
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
heart
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
pancreas
5
parathyroid adenoma
5
right atrium auricular region
5
skeletal muscle myoblast
5
subcutaneous abdominal adipose tissue
5
testis
5
vagina
4
22Rv1
4
SK-N-DZ
4
SK-N-SH
4
T cell
4
T-cell
4
angular gyrus
4
aorta
4
bone tissue
4
bronchial epithelial cell
4
cardiomyocytes (cardiac muscle cell)
4
cingulate gyrus
4
colonic mucosa
4
coronary artery
4
duodenal mucosa
4
endothelial cell of hepatic sinusoid
4
epithelial cell of prostate
4
esophagus
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
frontal cortex
4
gamma-delta T cell
4
heart right ventricle
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
kidney tubule cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
nephron progenitor
4
neutrophil
4
osteoblast
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle satellite cell
4
stomach smooth muscle
4
thoracic aorta
4
tibial artery
4
uterus
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
Ammon's horn
3
B Cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
LNCaP clone FGC
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
MCF 10A
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
T47D
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
astrocyte
3
cardiac fibroblast
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney cell
Life stage
embryonic
Date released
1
February, 2024
Software used
1
deeptools
1
r
1
samtools
1
umitools
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP2
biosample_term_name!
cardiac muscle cell
relevant_life_stage!
embryonic
Showing 1 of 1 results
table-tab-icon
matrix-icon
FileSet
DSR811PAV
released
Annotation file set
: Cell type gene expression mean TPM and bw of neural cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP