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Schema
Citing CMDGA
Clear Filters
Annotation type
39
target gene predictions
2
binding sites
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
86
monocyte
41
stomach
38
heart
37
CD8-positive, alpha-beta T cell
33
lung
33
muscle of arm
32
brain
29
small intestine
28
adrenal gland
28
large intestine
28
muscle of back
28
placenta
27
common myeloid progenitor, CD34-positive
27
muscle of leg
26
left lung
22
A549
22
right lung
21
thymus
20
hematopoietic multipotent progenitor cell
20
neural progenitor cell
16
B cell
15
liver
15
spinal cord
15
spleen
14
CD4-positive, alpha-beta memory T cell
12
foreskin keratinocyte
12
heart left ventricle
11
MCF-7
11
breast cancer cell
10
sigmoid colon
9
foreskin fibroblast
9
gastric cancer cell
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
K562
8
Rhabdomyosarcoma
8
body of pancreas
8
cardiac muscle cell
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
natural killer cell
8
neuroblastoma cell
8
ovary
8
testis
8
upper lobe of left lung
7
H9
7
HepG2
7
Peyer's patch
7
adipose tissue
7
diffuse intrinsic pontine glioma
7
endocrine pancreas
7
esophageal adenocarcinoma
7
hepatocyte
7
layer of hippocampus
7
mononuclear cell
7
neurosphere
7
psoas muscle
7
retina
7
skeletal muscle tissue
7
thyroid gland
7
transverse colon
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
T-helper 1 cell
6
bronchial epithelial cell
6
caudate nucleus
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
fibroblast of lung
6
hESC cell
6
heart right ventricle
6
keratinocyte
6
liposarcoma
6
lower leg skin
6
mammary epithelial cell
6
neuroblastoma cell line
6
pancreas
6
prostate gland
6
squamous cell lung carcinoma
6
temporal lobe
5
22Rv1
5
HeLa-S3
5
SK-N-DZ
5
T cell
5
T-cell acute lymphoblastic leukemia
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
adipocyte
5
breast epithelium
5
colonic mucosa
5
endodermal cell
5
epithelial cell of prostate
5
esophagus muscularis mucosa
5
fibroblast of cardiac tissue
5
foreskin melanocyte
5
gastroesophageal sphincter
5
melanoma cell
5
mesenchymal stem cell
5
mesodermal cell
5
neuronal stem cell
5
omental fat pad
5
osteosarcoma
5
parathyroid adenoma
5
peripheral blood mononuclear cell
5
regulatory T cell
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
tibial nerve
4
SK-N-SH
4
T-cell
4
angular gyrus
4
aorta
4
ascending aorta
4
cerebellum
4
cingulate gyrus
4
duodenal mucosa
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
mammary gland epithelial cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
osteoblast
4
rhabdomyosarcoma cell
4
skeletal muscle myoblast
4
stomach smooth muscle
4
thoracic aorta
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Ewing sarcoma
3
GM06990
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RPMI8226
3
RWPE1
3
SK-MEL-5
3
SK-N-MC
3
SW480
3
T47D
3
WERI-Rb-1
3
acute myeloid leukemia
3
astrocyte
3
cardiac fibroblast
3
chorion membrane
3
choroid plexus epithelial cell
3
coronary artery
3
dermis lymphatic vessel endothelial cell
3
diffuse large B-cell lymphoma
3
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
limb
3
lung microvascular endothelial cell
3
lymphoblast
3
lymphoblastoid cell line
3
mesendoderm
3
naive T cell
3
neural cell
3
pancreatic ductal adenocarcinoma
3
pulmonary artery endothelial cell
3
putamen
3
retinal pigment epithelial cell
3
right atrium auricular region
3
skin fibroblast
3
suprapubic skin
Organ
2
embryo
Life stage
1
embryonic
Date released
1
February, 2021
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
sQTL
organ_slims!
kidney
Showing 2 of 2 results
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Download
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR416QNM
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP