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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
39
target gene predictions
2
binding sites
2
chromatin state
1
accessible chromatin
1
candidate regulatory elements
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
41
stomach
38
heart
33
lung
33
muscle of arm
32
brain
31
kidney
29
small intestine
28
adrenal gland
28
large intestine
28
muscle of back
28
placenta
27
muscle of leg
26
left lung
22
A549
22
right lung
21
thymus
20
hematopoietic multipotent progenitor cell
20
renal cortex interstitium
20
right kidney
19
neural progenitor cell
19
renal pelvis
18
left kidney
15
liver
15
spinal cord
15
spleen
12
heart left ventricle
11
MCF-7
11
breast cancer cell
10
sigmoid colon
9
gastric cancer cell
8
K562
8
Rhabdomyosarcoma
8
body of pancreas
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
neuroblastoma cell
8
ovary
8
testis
8
thyroid gland
8
transverse colon
8
upper lobe of left lung
7
H9
7
HepG2
7
Peyer's patch
7
adipose tissue
7
diffuse intrinsic pontine glioma
7
endocrine pancreas
7
esophageal adenocarcinoma
7
layer of hippocampus
7
psoas muscle
7
retina
7
skeletal muscle tissue
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
cardiac muscle cell
6
caudate nucleus
6
esophagus squamous epithelium
6
hESC cell
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
liposarcoma
6
lower leg skin
6
neuroblastoma cell line
6
pancreas
6
prostate gland
6
right renal pelvis
6
squamous cell lung carcinoma
6
substantia nigra
6
temporal lobe
6
tibial nerve
5
22Rv1
5
HeLa-S3
5
SK-N-DZ
5
T-cell acute lymphoblastic leukemia
5
WI38
5
adipocyte
5
breast epithelium
5
colonic mucosa
5
endodermal cell
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
melanoma cell
5
mesodermal cell
5
omental fat pad
5
osteosarcoma
5
parathyroid adenoma
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
4
HEK293
4
SK-N-SH
4
angular gyrus
4
aorta
4
ascending aorta
4
cerebellum
4
cingulate gyrus
4
duodenal mucosa
4
esophagus
4
eye
4
mesenchymal stem cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
neuronal stem cell
4
rhabdomyosarcoma cell
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
vagina
3
CMK
3
Ewing sarcoma
3
GM06990
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RPMI8226
3
RWPE1
3
SK-MEL-5
3
SK-N-MC
3
SW480
3
T47D
3
WERI-Rb-1
3
chorion membrane
3
coronary artery
3
diffuse large B-cell lymphoma
3
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
immortal human breast epithelial cell line cell
3
limb
3
lymphoblast
3
lymphoblastoid cell line
3
mesendoderm
3
neural cell
3
pancreatic ductal adenocarcinoma
3
putamen
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
umbilical cord
3
urinary bladder
3
uterus
2
A172
2
A673
2
ACC112
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
Ammon's horn
2
B cell
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
C4-2B
2
COLO205
2
Caco-2 cell
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM04503
2
GM04504
2
GM08714
2
GM10248
2
GM10266
2
GM12873
2
GM12891
2
GM12892
2
GM18507
2
GM19238
Organ
2
embryo
Life stage
1
embryonic
Date released
1
February, 2021
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
primary cell
Showing 2 of 2 results
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Download
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR416QNM
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP