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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
3
binding sites
2
candidate regulatory elements
2
gene expression
2
histone modifications
2
target gene predictions
1
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
86
monocyte
37
CD8-positive, alpha-beta T cell
27
common myeloid progenitor, CD34-positive
17
B cell
14
CD4-positive, alpha-beta memory T cell
11
foreskin keratinocyte
10
natural killer cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
foreskin fibroblast
8
trophoblast cell
7
mononuclear cell
7
neurosphere
6
T-helper 1 cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
fibroblast of lung
6
hepatocyte
6
mammary epithelial cell
6
regulatory T cell
5
T-helper 17 cell
5
T-helper 2 cell
5
bronchial epithelial cell
5
keratinocyte
5
peripheral blood mononuclear cell
5
skeletal muscle myoblast
4
T cell
4
T-cell
4
endothelial cell
4
epithelial cell of prostate
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
mast cell
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
osteoblast
3
CD1c-positive myeloid dendritic cell
3
astrocyte
3
cardiac fibroblast
3
endothelial cell of lymphatic vessel
3
fibroblast
3
fibroblast of cardiac tissue
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
hepatic stellate cell
3
kidney tubule cell
3
lung microvascular endothelial cell
3
macrophage
3
mammary gland epithelial cell
3
naive T cell
3
neuronal stem cell
3
pericyte cell
3
pulmonary artery endothelial cell
3
retinal pigment epithelial cell
2
acute myeloid leukemia cell
2
adipocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
brain microvascular endothelial cell
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endocardial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
fibroblast of gingiva
2
fibroblast of peridontal ligament
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
mantle cell lymphoma cell
2
non-pigmented ciliary epithelial cell
2
pancreatic ductal cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
regular ventricular cardiac myocyte
2
renal cortical epithelial cell
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
skin fibroblast
2
smooth muscle cell
2
smooth muscle cell of the brain vasculature
2
stromal cell of bone marrow
2
tracheal epithelial cell
1
Adipose stromal cell
1
B-cell lymphoma cell
1
B-lymphocyte
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Ishikawa
1
Rhabdoid Tumor of the Kidney
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
Th1 cell
1
Th17 cell
1
acute myeloid leukemia
1
alveolar cell type II
1
amnion mesenchymal stem cell
1
amniotic epithelial cell
1
amniotic stem cell
1
aortic adventitial fibroblast
1
aortic endothelial cell
1
bone cell
1
bone marrow cell
1
brain pericyte
1
cardiac muscle myoblast
1
cholangiocyte
1
chronic lymphocytic leukemia cell
1
columnar chondrocyte
1
dendritic cell
1
effector memory CD4-positive, alpha-beta T cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
erythrocyte
1
erythroid cell
1
erythroid progenitor cell
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
granulocyte
1
head and neck neoplasia
1
head and neck squamous cell carcinoma
1
intestinal epithelial cell
1
kidney capillary endothelial cell
1
leukemic stem cell
1
luminal epithelial cell of mammary gland
1
mammary stem cell
1
mature neutrophil
1
meningioma cell
1
mesenchymal stem cell
1
meso-epithelial cell
1
mononuclear cell of bone marrow
1
mycosis fungoides
1
myeloid leukocyte
1
myofibroblast cell
1
myotube
1
neoplastic cell
1
neural progenitor cell
1
neutrophil progenitor cell
1
pancreatic endocrine cell
1
peripheral blood
1
peripheral blood stem cell
1
plasma cell
1
prostate gland cancer cell
1
pulmonary interstitial fibroblast
1
regular cardiac myocyte
1
renal epithelial cell
1
renal proximal tubule cell
1
seminoma cell
1
small cell ovarian carcinoma cell
1
somatic muscle myotube
1
sperm
1
umbilical vein endothelial cell
1
undifferentiated pleomorphic sarcoma
1
urinary bladder cancer cell
Organ
4
connective tissue
Life stage
2
unknown
Date released
3
February, 2021
1
September, 2022
Software used
2
macs
1
encode-ccres
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
award.project!
T1D
Showing 4 of 4 results
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Download
FileSet
DSR292OXQ
released
Annotation file set
: Candidate regulatory elements for BSS01397 osteoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR515FLX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE osteoblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR001OWQ
released
Annotation file set
: Histone modifications annotation for Bone Osteobl from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR164JMU
released
Annotation file set
: Histone modifications annotation for Bone Osteoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP