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Schema
Citing CMDGA
Clear Filters
Annotation type
39
target gene predictions
8
gene expression
2
binding sites
2
chromatin state
1
accessible chromatin
1
candidate regulatory elements
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
86
monocyte
41
stomach
38
heart
37
CD8-positive, alpha-beta T cell
33
lung
33
muscle of arm
32
brain
31
kidney
29
small intestine
28
adrenal gland
28
large intestine
28
muscle of back
28
placenta
27
common myeloid progenitor, CD34-positive
27
muscle of leg
26
left lung
22
A549
22
right lung
21
neural progenitor cell
21
thymus
20
hematopoietic multipotent progenitor cell
20
renal cortex interstitium
20
right kidney
19
B cell
19
renal pelvis
18
left kidney
15
liver
15
spinal cord
15
spleen
14
CD4-positive, alpha-beta memory T cell
12
foreskin keratinocyte
12
heart left ventricle
11
breast cancer cell
11
natural killer cell
10
sigmoid colon
9
foreskin fibroblast
9
gastric cancer cell
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
K562
8
Rhabdomyosarcoma
8
body of pancreas
8
cardiac muscle cell
8
chorionic villus
8
gastrocnemius medialis
8
hepatocyte
8
muscle of trunk
8
neuroblastoma cell
8
ovary
8
testis
8
upper lobe of left lung
7
H9
7
HepG2
7
Peyer's patch
7
adipocyte
7
adipose tissue
7
diffuse intrinsic pontine glioma
7
endocrine pancreas
7
esophageal adenocarcinoma
7
layer of hippocampus
7
mononuclear cell
7
neuronal stem cell
7
neurosphere
7
psoas muscle
7
retina
7
skeletal muscle tissue
7
thyroid gland
7
transverse colon
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
T-helper 1 cell
6
bronchial epithelial cell
6
caudate nucleus
6
esophagus squamous epithelium
6
fibroblast of lung
6
hESC cell
6
heart right ventricle
6
keratinocyte
6
left renal cortex interstitium
6
left renal pelvis
6
liposarcoma
6
lower leg skin
6
neuroblastoma cell line
6
pancreas
6
prostate gland
6
right renal pelvis
6
squamous cell lung carcinoma
6
temporal lobe
5
22Rv1
5
HeLa-S3
5
SK-N-DZ
5
T cell
5
T-cell acute lymphoblastic leukemia
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
breast epithelium
5
colonic mucosa
5
endodermal cell
5
epithelial cell of prostate
5
esophagus muscularis mucosa
5
fibroblast
5
fibroblast of cardiac tissue
5
foreskin melanocyte
5
gastroesophageal sphincter
5
melanoma cell
5
mesenchymal stem cell
5
mesodermal cell
5
omental fat pad
5
osteosarcoma
5
parathyroid adenoma
5
peripheral blood mononuclear cell
5
regulatory T cell
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
tibial nerve
4
HEK293
4
SK-N-SH
4
T-cell
4
angular gyrus
4
cerebellum
4
cingulate gyrus
4
duodenal mucosa
4
endothelial cell
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
hepatic stellate cell
4
macrophage
4
mast cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
osteoblast
4
rhabdomyosarcoma cell
4
skeletal muscle myoblast
4
smooth muscle cell
4
stomach smooth muscle
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Ewing sarcoma
3
GM06990
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RPMI8226
3
RWPE1
3
SK-MEL-5
3
SK-N-MC
3
SW480
3
WERI-Rb-1
3
acute myeloid leukemia
3
astrocyte
3
cardiac fibroblast
3
chorion membrane
3
diffuse large B-cell lymphoma
3
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
fibroblast of villous mesenchyme
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
limb
3
lymphoblast
3
lymphoblastoid cell line
3
mammary epithelial cell
3
mesendoderm
3
naive T cell
3
neural cell
3
pancreatic ductal adenocarcinoma
3
pericyte cell
3
putamen
3
retinal pigment epithelial cell
3
right atrium auricular region
3
skin fibroblast
3
suprapubic skin
Organ
2
embryo
Life stage
1
embryonic
Date released
1
February, 2021
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
April, 2020
organ_slims!
mammary gland
vasculature
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR416QNM
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP