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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
22
A549
11
MCF-7
11
breast cancer cell
9
gastric cancer cell
8
K562
8
Rhabdomyosarcoma
8
neuroblastoma cell
7
H9
7
HepG2
6
B-lymphoblastoid cell line
6
diffuse intrinsic pontine glioma
6
liposarcoma
6
squamous cell lung carcinoma
5
Chondroid Chordoma
5
HeLa-S3
5
SK-N-DZ
5
WI38
5
esophageal adenocarcinoma
5
hESC cell
5
melanoma cell
4
HEK293
4
SK-N-SH
4
osteosarcoma
3
CMK
3
Ewing sarcoma
3
GM06990
3
GM12864
3
GM12865
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY1
3
OCI-LY7
3
PC-9
3
RPMI8226
3
SK-MEL-5
3
SK-N-MC
3
SW480
3
T47D
3
WERI-Rb-1
3
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
immortal human breast epithelial cell line cell
3
lymphoblast
3
lymphoblastoid cell line
2
A172
2
A673
2
ACC112
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
COLO205
2
Caco-2 cell
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM04503
2
GM04504
2
GM08714
2
GM10248
2
GM10266
2
GM12873
2
GM12891
2
GM12892
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
GM23338
2
H1-hESC
2
H4
2
H54
2
H7-hESC
2
HCT116
2
HK-2 cell
2
HS-27A
2
HS-5
2
HS-SY-2 cell
2
HT1080
2
HUES48
2
HUES6
2
HUES64
2
HuH-7
2
Jurkat
2
KARPAS-422 cell
2
KBM-7
2
KMS-11
2
KOPT-K1
2
L1-S8
2
LoVo cell
2
Loucy
2
M059J
2
Mantle cell lymphoma
2
NAMALWA
2
NB4
2
NCI-H929
2
NT2-D1 cell
2
OCI-LY3
2
Panc1
2
RCC 7860
2
RKO
2
RPMI7951
2
RS4-11 cell
2
Rh-4 cell
2
SJCRH30
2
SJSA1
2
SU-DHL-6
2
UCSF-4
2
acute myeloid leukemia
2
cardiac muscle cell
2
diffuse large B-cell lymphoma
2
epithelial ovarian cancer cell
2
esophageal carcinoma
2
fibroblast of cardiac tissue
2
glioblastoma multiforme cancer stem cell
2
hematopoietic cell
2
iPS DF 19.11
2
iPS DF 19.7
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
lymphocyte
2
metastatic melanoma
2
multiple myeloma cell line
2
pancreatic cell line
2
renal cell carcinoma
2
synovial sarcoma cell
2
triple-negative breast cancer
2
umbilical cord mesenchymal stem cell line cell
2
urothelium cell line
1
143B
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
8988T
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
AG04449
1
AG04450
1
AG08395 cell
1
AG08396 cell
1
AG08470 cell
1
AG09309
1
AG09319
1
AG20443
1
AGS cell
1
ALL-SIL cell
1
ARH-77 cell
1
AU565 cell
1
AsPC-1 cell
1
B-lymphocyte
1
BCBL-1 cell
1
BE2C
1
BEAS-2B cell
1
BG03
1
BGC-823 cell
1
BHY cell
1
BJ
1
BT-474 cell
1
BT-549 cell
1
Barrett's esophagus
1
BxPC-3 cell
1
C666-1 cell
1
CA46 cell
1
CAL-33 cell
1
CAL-51 cell
1
CCRF-CEM cell
Disease term
1
osteosarcoma
Organ
3
bone element
Life stage
1
child
1
young adult
Date released
2
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
prostate gland
Showing 3 of 3 results
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Download
FileSet
DSR401QAB
released
Annotation file set
: Candidate regulatory elements for BSS01267 MG63 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585UIG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MG63
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR685YUE
released
Annotation file set
: Histone modifications annotation for Bone MG-63 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP