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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
caQTL
1
candidate regulatory elements
1
chromatin state
1
eQTL
1
gene expression
0
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
primary cell
1
stem cell
Biosample term
40
common myeloid progenitor, CD34-positive
23
B cell
23
CD4-positive, alpha-beta memory T cell
15
CD8-positive, alpha-beta memory T cell
15
foreskin keratinocyte
13
mononuclear cell
12
CD14-positive monocyte
11
trophoblast cell
10
CD4-positive, alpha-beta T cell
10
natural killer cell
10
neurosphere
9
CD8-positive, alpha-beta T cell
9
T-helper 1 cell
9
endothelial cell of umbilical vein
9
fibroblast of lung
9
regulatory T cell
8
T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
dermis blood vessel endothelial cell
7
fibroblast of dermis
7
foreskin fibroblast
7
neutrophil
6
bronchial epithelial cell
6
epithelial cell of prostate
6
fibroblast of breast
6
fibroblast of cardiac tissue
6
mammary gland epithelial cell
6
myoepithelial cell of mammary gland
6
naive T cell
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
olfactory receptor cell
6
skeletal muscle myoblast
5
foreskin melanocyte
5
keratinocyte
5
kidney tubule cell
4
T-cell
4
dermis lymphatic vessel endothelial cell
4
lung microvascular endothelial cell
4
peripheral blood mononuclear cell
4
skin fibroblast
3
CD1c-positive myeloid dendritic cell
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
brain microvascular endothelial cell
3
cardiac fibroblast
3
choroid plexus epithelial cell
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
fibroblast of gingiva
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
iris pigment epithelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
mammary epithelial cell
3
non-pigmented ciliary epithelial cell
3
osteoblast
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
pulmonary artery endothelial cell
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
skeletal muscle cell
3
skeletal muscle satellite cell
3
smooth muscle cell of the brain vasculature
3
stromal cell of bone marrow
2
activated CD4-positive, alpha-beta T cell
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
cardiac muscle cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epidermal melanocyte
2
epithelial cell of amnion
2
hepatic stellate cell
2
hepatocyte
2
kidney capillary endothelial cell
2
luminal epithelial cell of mammary gland
2
macrophage
2
mammary stem cell
2
megakaryocyte
2
monocyte
2
naive B cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
pericyte cell
2
regular cardiac myocyte
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
amniotic epithelial cell
1
brain pericyte
1
cell
1
conventional dendritic cell
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell
1
erythroblast
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
inflammatory macrophage
1
memory B cell
1
mesenchymal stem cell
1
natural killer cell mediated cytotoxicity
1
non-classical monocyte
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
plasmacytoid dendritic cell
1
stellate neuron
Organ
1
connective tissue
Life stage
1
adult
Date released
1
February, 2021
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
ATAC-seq
biosample_term_name!
8988T
Showing 1 of 1 results
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Download
FileSet
DSR627LDJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP