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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
5
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
61
stomach
56
heart
49
lung
49
muscle of arm
45
brain
45
small intestine
44
adrenal gland
43
kidney
41
common myeloid progenitor, CD34-positive
41
large intestine
41
muscle of back
41
muscle of leg
41
placenta
40
A549
39
left lung
33
right lung
32
thymus
30
right kidney
29
hematopoietic multipotent progenitor cell
29
renal cortex interstitium
28
renal pelvis
27
CD14-positive monocyte
27
left kidney
23
B cell
23
CD4-positive, alpha-beta memory T cell
22
spinal cord
22
spleen
21
liver
16
heart left ventricle
16
sigmoid colon
16
trophoblast cell
15
CD8-positive, alpha-beta memory T cell
15
MCF-7
15
foreskin keratinocyte
14
K562
14
adipose tissue
13
body of pancreas
13
gastrocnemius medialis
13
mononuclear cell
13
muscle of trunk
13
ovary
13
thyroid gland
13
transverse colon
12
chorionic villus
12
psoas muscle
11
endocrine pancreas
10
Peyer's patch
10
adipocyte
10
fibroblast of lung
10
foreskin fibroblast
10
natural killer cell
10
neurosphere
10
pituitary stalk
10
testis
10
upper lobe of left lung
9
CD8-positive, alpha-beta T cell
9
H9
9
HeLa-S3
9
T-helper 1 cell
9
endothelial cell of umbilical vein
9
heart right ventricle
9
layer of hippocampus
9
neural progenitor cell
9
retina
9
skeletal muscle tissue
9
tibial nerve
8
CD4-positive, alpha-beta T cell
8
T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
breast epithelium
8
cardiac muscle cell
8
caudate nucleus
8
dermis blood vessel endothelial cell
8
esophagus squamous epithelium
8
fibroblast of dermis
8
left renal cortex interstitium
8
left renal pelvis
8
lower leg skin
8
pancreas
8
regulatory T cell
8
right renal pelvis
7
SK-N-SH
7
epithelial cell of prostate
7
esophagus muscularis mucosa
7
mesenchymal stem cell
7
omental fat pad
7
parathyroid adenoma
7
right renal cortex interstitium
7
skeletal muscle myoblast
7
substantia nigra
7
temporal lobe
6
22Rv1
6
SK-N-DZ
6
T-cell
6
WI38
6
angular gyrus
6
aorta
6
ascending aorta
6
bronchial epithelial cell
6
chorion membrane
6
cingulate gyrus
6
colonic mucosa
6
coronary artery
6
dendritic cell
6
duodenal mucosa
6
endodermal cell
6
endometrium adenocarcinoma
6
esophagus
6
eye
6
fibroblast of breast
6
fibroblast of cardiac tissue
6
gastroesophageal sphincter
6
hepatocyte
6
immortal human breast epithelial cell line cell
6
keratinocyte
6
mammary gland epithelial cell
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
prostate gland
6
stomach smooth muscle
6
thoracic aorta
6
tongue
6
trophoblast
6
vagina
5
LNCaP clone FGC
5
T47D
5
cerebellum
5
foreskin melanocyte
5
kidney tubule cell
5
limb
5
mesodermal cell
5
right atrium auricular region
5
subcutaneous abdominal adipose tissue
5
tibial artery
5
urinary bladder
5
uterus
4
A673
4
Brodmann (1909) area 46
4
GM12878
4
HAP-1
4
HEK293
4
HT-29
4
HepG2
4
IMR-90
4
MM.1S
4
NAMALWA cell
4
OCI-LY7
4
PC-9
4
Panc1
4
astrocyte
4
bipolar neuron
4
dermis lymphatic vessel endothelial cell
4
frontal cortex
4
iPS DF 19.11
4
lung microvascular endothelial cell
4
mammary epithelial cell
4
mesendoderm
4
muscle cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neural cell
4
osteoblast
4
peripheral blood mononuclear cell
4
skin fibroblast
3
A172
3
ACC112
3
ACHN
3
Ammon's horn
3
C4-2B
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Caki2
3
DND-41
3
DOHH2
3
Daoy
3
EH
3
EL
3
ELF-1
3
ELR
3
G401
3
GM04503
3
GM04504
3
GM06990
3
GM08714
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12875
3
GM23248
3
GM23338
3
H1-hESC
3
H4
3
H54
3
H7-hESC
3
HCT116
Organ
3
embryo
Life stage
2
adult
2
embryonic
Date released
4
September, 2022
1
May, 2021
Software used
4
r
1
abc
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR245YQC
released
Annotation file set
: Candidate regulatory elements for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR442ZJZ
released
Annotation file set
: Candidate regulatory elements for BSS00067 AG09319 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR472ULW
released
Annotation file set
: Target gene predictions for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR366WGG
released
Annotation file set
: Target gene predictions for BSS00067 AG09319 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR486DHW
released
Annotation file set
: enhancer-gene predicton of H7 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP