Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
candidate regulatory elements
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
16
HiC
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
23
stomach
19
CD14-positive monocyte
18
heart
17
lung
17
muscle of arm
16
adrenal gland
15
common myeloid progenitor, CD34-positive
15
kidney
15
large intestine
15
muscle of back
15
muscle of leg
15
small intestine
13
brain
13
left lung
13
placenta
11
renal cortex interstitium
11
right lung
10
pituitary stalk
10
renal pelvis
10
right kidney
10
spleen
10
thymus
9
CD8-positive, alpha-beta T cell
9
hematopoietic multipotent progenitor cell
9
left kidney
8
CD4-positive, alpha-beta T cell
8
spinal cord
7
B cell
7
H9
7
foreskin keratinocyte
7
liver
6
T-cell
6
adipocyte
6
cardiac muscle cell
6
dendritic cell
6
foreskin fibroblast
6
heart left ventricle
6
sigmoid colon
6
trophoblast cell
5
CD4-positive, alpha-beta memory T cell
5
MCF-7
5
body of pancreas
5
endothelial cell of umbilical vein
5
gastrocnemius medialis
5
muscle of trunk
5
ovary
5
subcutaneous abdominal adipose tissue
5
thyroid gland
5
transverse colon
4
A549
4
Peyer's patch
4
WI38
4
breast epithelium
4
chorionic villus
4
dermis blood vessel endothelial cell
4
esophagus squamous epithelium
4
fibroblast of lung
4
gastroesophageal sphincter
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
mammary epithelial cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
natural killer cell
4
neurosphere
4
pancreas
4
peripheral blood mononuclear cell
4
psoas muscle
4
right renal pelvis
4
testis
4
upper lobe of left lung
3
HeLa-S3
3
LNCAP
3
MCF 10A
3
SK-N-SH
3
T-helper 1 cell
3
cardiac fibroblast
3
endocrine pancreas
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
foreskin melanocyte
3
heart right ventricle
3
layer of hippocampus
3
mesenchymal stem cell
3
mesodermal cell
3
neuronal stem cell
3
omental fat pad
3
parathyroid adenoma
3
retina
3
right renal cortex interstitium
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
3
uterus
2
22Rv1
2
A673
2
AG10803
2
BJAB cell
2
CD4-positive helper T cell
2
GM12878
2
HAP-1
2
HEK293
2
HT-29
2
HepG2
2
IMR-90
2
Jurkat
2
K562
2
MCF 10A cell
2
MM.1S
2
NAMALWA
2
OCI-LY7
2
PC-9
2
Panc1
2
SK-N-DZ
2
T-helper 17 cell
2
T-helper 2 cell
2
THP-1
2
U937
2
adipose tissue
2
angular gyrus
2
aorta
2
ascending aorta
2
astrocyte
2
bipolar neuron
2
bronchial epithelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
dermis microvascular lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
esophagus
2
eye
2
fibroblast of breast
2
fibroblast of dermis
2
hepatocyte
2
iPS DF 19.11
2
keratinocyte
2
lung microvascular endothelial cell
2
mesendoderm
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
myotube
2
neural cell
2
neuroepithelial stem cell
2
neutrophil
2
osteoblast
2
placental basal plate
2
prostate gland
2
regulatory T cell
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
thoracic aorta
2
tongue
2
trophoblast
2
vagina
1
A172
1
ACC112
1
ACHN
1
AG04449
1
AG04450
1
AG09309
1
AG09319
1
Ammon's horn
1
B cell, CD19-positive
1
BE2C
1
BJ
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
CD8-positive, alpha-beta memory T cell
1
CMK
1
Caco-2
1
Caki2
1
D721Med
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
G401
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
Organ
2
blood
2
bodily fluid
1
connective tissue
1
limb
1
skin of body
Life stage
2
adult
Date released
2
February, 2021
1
May, 2021
Software used
r
2
encode-ccres
1
abc
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
software_used.software.name!
r
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR396CCK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE K562
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR229GNK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM23248
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR412LFE
released
Annotation file set
: enhancer-gene predicton of K562-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP