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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
0
primary cell
Biosample term
60
HeLa-S3
41
common myeloid progenitor, CD34-positive
40
H1-hESC
30
K562
27
B cell
27
CD14-positive monocyte
23
CD4-positive, alpha-beta memory T cell
19
HFFc6
15
CD8-positive, alpha-beta memory T cell
15
H9
15
MCF-7
15
foreskin keratinocyte
14
natural killer cell
13
mononuclear cell
13
pericyte cell
12
CD8-positive, alpha-beta T cell
12
trophoblast cell
11
CD4-positive, alpha-beta T cell
10
GM12878
10
endothelial cell
10
endothelial cell of umbilical vein
10
foreskin fibroblast
10
neurosphere
10
pituitary stalk
9
T-helper 1 cell
9
regulatory T cell
8
T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
dermis blood vessel endothelial cell
8
fibroblast of dermis
8
keratinocyte
8
lymphocyte
8
smooth muscle cell
7
SK-N-SH
7
epithelial cell of prostate
7
fibroblast
7
fibroblast of cardiac tissue
7
macrophage
7
mammary gland epithelial cell
7
neutrophil
6
22Rv1
6
SK-N-DZ
6
T-cell
6
astrocyte
6
bronchial epithelial cell
6
endometrium adenocarcinoma
6
fibroblast of breast
6
immortal human breast epithelial cell line cell
6
myoepithelial cell of mammary gland
6
naive T cell
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
olfactory receptor cell
6
skeletal muscle myoblast
5
HCT116
5
HepG2
5
LNCaP clone FGC
5
T47D
5
colon epithelial cell
5
foreskin melanocyte
5
hepatocyte
5
kidney tubule cell
5
skin fibroblast
4
A673
4
CyT49
4
HAP-1
4
HEK293
4
HT-29
4
HUES8
4
MM.1S
4
NAMALWA cell
4
OCI-LY7
4
Panc1
4
dermis lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
iPS DF 19.11
4
iPSC derived cell line
4
luminal epithelial cell of mammary gland
4
mammary epithelial cell
4
mast cell
4
osteoblast
4
pancreatic delta cell
4
peripheral blood mononuclear cell
4
skeletal muscle satellite cell
3
A172
3
ACC112
3
ACHN
3
C4-2B
3
CD1c-positive myeloid dendritic cell
3
CMK
3
Caki2
3
DND-41
3
DOHH2
3
Daoy
3
EH
3
EL
3
ELF-1
3
ELR
3
G401
3
GM04503
3
GM04504
3
GM06990
3
GM08714
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12875
3
GM18507
3
GM19238
3
GM19239
3
GM19240
3
GM23248
3
GM23338
3
H4
3
H54
3
H7-hESC
3
HL-60
3
HS-27A
3
HS-5
3
HT1080
3
HUES48
3
HUES6
3
HUES64
3
KARPAS-422 cell
3
KBM-7
3
KMS-11
3
KOPT-K1
3
L1-S8
3
LHCN-M2
3
LNCAP
3
LoVo cell
3
Loucy
3
M059J
3
MCF 10A
3
MG63
3
NB4
3
NCI-H929
3
OCI-LY1
3
OCI-LY3
3
PC-3
3
RCC 7860
3
RPMI7951
3
RPMI8226
3
RWPE1
3
RWPE2
3
SJCRH30
3
SJSA1
3
SK-MEL-5
3
SK-N-MC
3
SU-DHL-6
3
SW480
3
UCSF-4
3
WERI-Rb-1
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
brain microvascular endothelial cell
3
cardiac fibroblast
3
cardiac muscle cell
3
choroid plexus epithelial cell
3
endocardial cell
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
fibroblast of gingiva
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
hepatic stellate cell
3
iPS DF 19.7
3
iPS DF 6.9
3
iPS-11a
3
iPS-15b
3
iPS-18a
3
iPS-18c
3
iPS-20b
3
iris pigment epithelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
monocyte
3
non-pigmented ciliary epithelial cell
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
pulmonary artery endothelial cell
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
3
stromal cell of bone marrow
3
type B pancreatic cell
2
8988T
2
AG04449 cell
Disease term
2
plasma cell myeloma
Organ
3
blood
3
bodily fluid
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
award.project!
community
organ_slims!
lung
Showing 3 of 3 results
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Download
FileSet
DSR839RYY
released
Annotation file set
: Candidate regulatory elements for BSS01537 RPMI8226 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR880QQL
released
Annotation file set
: Target gene predictions for BSS01537 RPMI8226 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR298TFB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE RPMI8226
Lab:
AMP-T2D consortium
Project:
AMP