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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
target gene predictions
2
binding sites
2
chromatin state
1
histone modifications
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
4
bronchial epithelial cell
1
bronchial goblet cell
Organ
175
kidney
153
musculature of body
141
epithelium
132
lung
128
brain
116
intestine
102
limb
96
connective tissue
80
heart
76
skin of body
69
large intestine
65
vasculature
59
extraembryonic component
53
embryo
53
stomach
48
blood vessel
47
bodily fluid
43
blood
37
small intestine
35
pancreas
34
ureter
29
adrenal gland
29
mammary gland
29
placenta
28
penis
28
prostate gland
27
liver
25
bone element
22
adipose tissue
21
lymph node
20
eye
20
thymus
19
esophagus
17
gonad
16
spinal cord
15
spleen
14
artery
9
lymphoid tissue
9
testis
9
thyroid gland
9
uterus
8
mouth
8
nerve
ovary
7
vein
5
breast
5
bronchus
4
lymphatic vessel
4
skeleton
4
tongue
4
vagina
3
urinary bladder
2
bone marrow
1
nose
Life stage
4
unknown
Date released
2
February, 2021
2
September, 2022
1
February, 2024
Software used
2
encode-ccres
2
r
1
deltasvm
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
5
AMP
RFA
5
AMP
biosample_term_name!
endodermal cell
organ_slims!
ovary
Showing 5 of 5 results
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Download
FileSet
DSR235IRL
released
Annotation file set
: Candidate regulatory elements for BSS00153 bronchial epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR668FCE
released
Annotation file set
: Candidate regulatory elements for BSS00150 bronchial epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR090WNM
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE bronchial epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR677KIG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE bronchial epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR915JYD
released
Annotation file set
: Variant allelic effects annotation of Airway goblet cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP