Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
0
variant allelic effects
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
39
stomach
38
heart
34
muscle of arm
32
lung
30
brain
30
kidney
28
adrenal gland
28
muscle of back
28
small intestine
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
26
left lung
26
placenta
22
right lung
21
A549
21
renal cortex interstitium
21
right kidney
20
renal pelvis
19
hematopoietic multipotent progenitor cell
19
thymus
18
left kidney
14
B cell
14
CD4-positive, alpha-beta memory T cell
14
spinal cord
14
spleen
13
liver
12
heart left ventricle
11
foreskin keratinocyte
9
MCF-7
9
body of pancreas
9
sigmoid colon
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
adipose tissue
8
cardiac muscle cell
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
thyroid gland
8
tibial nerve
8
transverse colon
7
CD8-positive, alpha-beta T cell
7
H9
7
K562
7
Peyer's patch
7
endocrine pancreas
7
endothelial cell of umbilical vein
7
foreskin fibroblast
7
left renal cortex interstitium
7
left renal pelvis
7
mononuclear cell
7
neurosphere
7
retina
7
right renal pelvis
7
testis
7
upper lobe of left lung
6
T cell
6
T-helper 1 cell
6
caudate nucleus
6
dermis blood vessel endothelial cell
6
esophagus squamous epithelium
6
fibroblast
6
fibroblast of lung
6
heart right ventricle
6
layer of hippocampus
6
lower leg skin
6
natural killer cell
6
pancreas
6
psoas muscle
6
right renal cortex interstitium
6
skeletal muscle tissue
5
HeLa-S3
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
adipocyte
5
ascending aorta
5
breast epithelium
5
coronary artery
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
hepatocyte
5
neural progenitor cell
5
omental fat pad
5
parathyroid adenoma
5
regulatory T cell
5
right atrium auricular region
5
skeletal muscle myoblast
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
5
thoracic aorta
5
tibial artery
4
22Rv1
4
T-cell
4
angular gyrus
4
aorta
4
bronchial epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
epithelial cell of esophagus
4
epithelial cell of prostate
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
keratinocyte
4
mammary gland epithelial cell
4
mesenchymal stem cell
4
mesodermal cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
prostate gland
4
smooth muscle cell
4
stomach smooth muscle
4
tongue
4
trophoblast
4
vagina
3
HEK293
LNCaP clone FGC
3
MCF 10A
3
T47D
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
cardiac fibroblast
3
cerebellum
3
chorion membrane
3
choroid plexus epithelial cell
3
endometrium adenocarcinoma
3
enterocyte
3
epithelial cell of proximal tubule
3
fibroblast of cardiac tissue
3
frontal cortex
3
globus pallidus
3
glomerular endothelial cell
3
immortal human breast epithelial cell line cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
kidney tubule cell
3
left cardiac atrium
3
limb
3
lung microvascular endothelial cell
3
macrophage
3
mammary epithelial cell
3
middle frontal gyrus
3
myofibroblast cell
3
naive T cell
3
neural cell
3
putamen
3
renal cortical epithelial cell
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
3
subcutaneous adipose tissue
3
suprapubic skin
3
urinary bladder
3
uterus
2
cardiac fibroblast
2
muscle of leg
2
A172
2
ACC112
2
ACHN
2
AG10803
2
Ammon's horn
2
Brodmann (1909) area 46
2
C4-2B
2
CD1c-positive myeloid dendritic cell
2
Caki2
2
DOHH2
2
EH
2
EL
2
ELF-1
2
ELR
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
Organ
1
lymph node
Life stage
child
1
young adult
Date released
1
February, 2021
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
LNCaP clone FGC
relevant_life_stage!
child
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR051ANU
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE DND-41
Lab:
AMP-T2D consortium
Project:
AMP