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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
gene expression
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
27
common myeloid progenitor, CD34-positive
17
B cell
14
CD4-positive, alpha-beta memory T cell
11
foreskin keratinocyte
9
fibroblast
9
natural killer cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
7
CD8-positive, alpha-beta T cell
7
endothelial cell of umbilical vein
7
mononuclear cell
7
neurosphere
7
trophoblast cell
6
T cell
6
T-helper 1 cell
6
dermis blood vessel endothelial cell
6
fibroblast of lung
6
foreskin fibroblast
6
macrophage
5
T-helper 17 cell
5
T-helper 2 cell
5
endothelial cell
5
regulatory T cell
5
skeletal muscle myoblast
4
T-cell
4
bronchial epithelial cell
4
cardiac muscle cell
4
epithelial cell of esophagus
4
epithelial cell of prostate
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
hepatocyte
4
keratinocyte
4
mammary gland epithelial cell
mast cell
4
myoepithelial cell of mammary gland
4
myofibroblast cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
smooth muscle cell
3
adipocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
cardiac fibroblast
3
choroid plexus epithelial cell
3
endothelial cell of lymphatic vessel
3
enterocyte
3
epithelial cell of proximal tubule
3
fibroblast of cardiac tissue
3
glomerular endothelial cell
3
hepatic stellate cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
naive T cell
3
pericyte cell
3
renal cortical epithelial cell
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
2
cardiac fibroblast
2
CD1c-positive myeloid dendritic cell
2
Schwann cell
2
astrocyte
2
astrocyte of the spinal cord
2
basal cell
2
brain microvascular endothelial cell
2
brain pericyte
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endocardial cell
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
glomerular visceral epithelial cell
2
goblet cell
2
iris pigment epithelial cell
2
kidney capillary endothelial cell
2
neuronal stem cell
2
non-pigmented ciliary epithelial cell
2
osteoblast
2
pulmonary artery endothelial cell
2
regular ventricular cardiac myocyte
2
retinal pigment epithelial cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
skin fibroblast
2
stromal cell of bone marrow
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
amnion mesenchymal stem cell
1
amniotic epithelial cell
1
amniotic stem cell
1
bronchial goblet cell
1
cholangiocyte
1
cortical cell of adrenal gland
1
dendritic cell
1
effector memory CD4-positive, alpha-beta T cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
erythrocyte
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
granulosa cell
1
luminal epithelial cell of mammary gland
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary stem cell
1
mesenchymal stem cell
1
mesothelial cell
1
naive t cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
regular cardiac myocyte
1
thyroid follicular cell
1
type II pneumocyte
Organ
3
epithelium
3
kidney
Life stage
2
unknown
Date released
1
February, 2021
1
May, 2020
1
September, 2022
Software used
1
deltasvm
1
encode-ccres
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
mast cell
Showing 3 of 3 results
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Download
FileSet
DSR198YGQ
released
Annotation file set
: Candidate regulatory elements for BSS01080 kidney epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR850PZZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE kidney epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR687VBP
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney epithelial cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP