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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
33
muscle of arm
29
kidney
28
muscle of back
27
muscle of leg
20
renal cortex interstitium
20
right kidney
19
renal pelvis
18
left kidney
8
gastrocnemius medialis
8
muscle of trunk
7
psoas muscle
6
left renal cortex interstitium
6
left renal pelvis
6
right renal pelvis
6
skeletal muscle tissue
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
right renal cortex interstitium
4
stomach smooth muscle
3
HEK293
3
kidney tubule cell
2
A673
2
ACHN
2
Caki2
2
G401
2
LHCN-M2
2
RCC 7860
2
SJCRH30
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
renal cortical epithelial cell
2
skeletal muscle cell
2
skeletal muscle satellite cell
1
HEK293T
1
RCC
1
forelimb muscle
1
hindlimb muscle
1
kidney capillary endothelial cell
1
myotube
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
1
renal cell carcinoma
Organ
2
epithelium
2
kidney
0
musculature of body
Life stage
2
unknown
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR879POD
released
Annotation file set
: Candidate regulatory elements for BSS01491 renal cortical epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR925XQP
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE renal cortical epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP