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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
3
binding sites
2
candidate regulatory elements
2
gene expression
2
histone modifications
2
target gene predictions
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
27
common myeloid progenitor, CD34-positive
17
B cell
14
CD4-positive, alpha-beta memory T cell
11
foreskin keratinocyte
9
natural killer cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
7
CD8-positive, alpha-beta T cell
7
mononuclear cell
7
neurosphere
7
trophoblast cell
6
T-helper 1 cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
fibroblast of lung
6
foreskin fibroblast
5
T-helper 17 cell
5
T-helper 2 cell
5
regulatory T cell
4
T cell
4
T-cell
4
bronchial epithelial cell
4
epithelial cell of prostate
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
skeletal muscle myoblast
3
cardiac fibroblast
3
endothelial cell
3
endothelial cell of lymphatic vessel
3
fibroblast
3
fibroblast of cardiac tissue
3
keratinocyte
3
kidney tubule cell
3
lung microvascular endothelial cell
3
macrophage
3
mammary epithelial cell
3
mammary gland epithelial cell
3
mast cell
3
naive T cell
3
pericyte cell
2
CD1c-positive myeloid dendritic cell
2
adipocyte
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
brain microvascular endothelial cell
2
cardiac muscle cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endocardial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hepatic stellate cell
2
hepatocyte
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
neuronal stem cell
2
non-pigmented ciliary epithelial cell
2
osteoblast
2
pulmonary artery endothelial cell
2
regular ventricular cardiac myocyte
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
skin fibroblast
2
smooth muscle cell
2
smooth muscle cell of the brain vasculature
2
stromal cell of bone marrow
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
amnion mesenchymal stem cell
1
amniotic epithelial cell
1
amniotic stem cell
1
brain pericyte
1
cholangiocyte
1
dendritic cell
1
effector memory CD4-positive, alpha-beta T cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
erythrocyte
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
kidney capillary endothelial cell
1
luminal epithelial cell of mammary gland
1
mammary stem cell
1
mesenchymal stem cell
1
myofibroblast cell
1
regular cardiac myocyte
Organ
2
connective tissue
Life stage
2
unknown
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
award.project!
T1D
biosample_term_name!
amnion mesenchymal stem cell
Showing 2 of 2 results
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Download
FileSet
DSR292OXQ
released
Annotation file set
: Candidate regulatory elements for BSS01397 osteoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR515FLX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE osteoblast
Lab:
AMP-T2D consortium
Project:
AMP