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Schema
Citing CMDGA
Clear Filters
Annotation type
19
gene expression
17
accessible chromatin
7
binding sites
5
histone modifications
4
candidate regulatory elements
4
target gene predictions
4
variant allelic effects
3
differential activity
2
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
2
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
15
tissue
4
cell line
4
primary cell
2
in vitro differentiated cells
Biosample term
2
hepatic stellate cell
2
hepatocyte
Disease term
2
liver disease
Organ
96
epithelium
57
connective tissue
38
skin of body
35
vasculature
21
blood vessel
21
penis
16
kidney
13
extraembryonic component
13
mammary gland
9
brain
9
lung
8
heart
7
embryo
7
lymphatic vessel
6
eye
6
vein
4
artery
4
blood
4
bodily fluid
4
bronchus
4
liver
4
musculature of body
4
prostate gland
2
bone element
2
bone marrow
2
esophagus
2
mouth
2
placenta
2
spinal cord
Life stage
3
adult
1
unknown
Date released
2
May, 2024
2
September, 2022
Software used
2
r
Lab
2
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Project
4
AMP
RFA
2
AMP
2
AMP2
biosample_term_name!
right atrium auricular region
Showing 4 of 4 results
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Download
FileSet
DSR128SRA
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of hepatic stellate cell derived from liver snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR529HOM
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of hepatocyte derived from liver snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR654OFJ
released
Annotation file set
: Candidate regulatory elements for BSS00554 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR613BLA
released
Annotation file set
: Candidate regulatory elements for BSS00553 hepatic stellate cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP