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Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
2
chromatin state
2
target gene predictions
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
33
muscle of arm
28
muscle of back
27
muscle of leg
11
foreskin keratinocyte
8
gastrocnemius medialis
8
muscle of trunk
7
psoas muscle
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
skeletal muscle tissue
5
breast epithelium
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
4
22Rv1
4
bronchial epithelial cell
4
epithelial cell of prostate
4
myoepithelial cell of mammary gland
4
prostate gland
4
stomach smooth muscle
3
LNCaP clone FGC
3
hepatocyte
3
keratinocyte
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
2
A673
2
C4-2B
2
LHCN-M2
2
LNCAP
2
PC-3
2
RWPE1
2
RWPE2
2
SJCRH30
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle cell
2
skeletal muscle satellite cell
1
VCaP
1
VCaP cell
1
amniotic epithelial cell
1
colon epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
forelimb muscle
1
hindlimb muscle
1
kidney capillary endothelial cell
1
luminal epithelial cell of mammary gland
1
myotube
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
Disease term
2
prostate adenocarcinoma
Organ
4
prostate gland
0
epithelium
0
musculature of body
Life stage
4
unknown
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
files.file_type!
bed gappedPeak
Showing 4 of 4 results
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Download
FileSet
DSR119SRZ
released
Annotation file set
: Candidate regulatory elements for BSS00002 22Rv1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR960CDL
released
Annotation file set
: Candidate regulatory elements for BSS00001 22Rv1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR636OUZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE 22Rv1
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR910NAQ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE 22Rv1
Lab:
AMP-T2D consortium
Project:
AMP