Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
2
accessible chromatin
1
candidate regulatory elements
1
eQTL
1
gene expression
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
cell line
1
tissue
Biosample term
21
stomach
18
heart
17
lung
17
muscle of arm
15
kidney
15
large intestine
15
muscle of back
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
muscle of leg
14
small intestine
13
brain
13
left lung
12
placenta
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
9
B cell
9
hematopoietic multipotent progenitor cell
9
left kidney
9
spleen
9
thymus
8
CD4-positive, alpha-beta T cell
7
CD8-positive, alpha-beta T cell
7
foreskin keratinocyte
7
spinal cord
6
heart left ventricle
6
liver
6
natural killer cell
5
CD4-positive, alpha-beta memory T cell
5
cardiac muscle cell
5
foreskin fibroblast
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
4
CD14-positive monocyte
4
Peyer's patch
4
T-cell
4
adipocyte
4
body of pancreas
4
chorionic villus
4
dermis blood vessel endothelial cell
4
endothelial cell of umbilical vein
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neuronal stem cell
4
neurosphere
4
ovary
4
peripheral blood mononuclear cell
4
right renal pelvis
4
testis
4
thyroid gland
4
transverse colon
4
trophoblast cell
4
upper lobe of left lung
3
T-helper 1 cell
3
breast epithelium
3
cardiac fibroblast
3
endocrine pancreas
3
endothelial cell
3
endothelial cell of lymphatic vessel
3
esophagus muscularis mucosa
3
fibroblast
3
fibroblast of lung
3
foreskin melanocyte
3
heart right ventricle
3
layer of hippocampus
3
macrophage
3
mammary epithelial cell
3
mast cell
3
mesodermal cell
3
omental fat pad
3
pancreas
3
parathyroid adenoma
3
psoas muscle
3
retina
3
right renal cortex interstitium
3
skeletal muscle tissue
3
smooth muscle cell
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
2
T-helper 17 cell
2
T-helper 2 cell
2
angular gyrus
2
aorta
2
ascending aorta
2
bronchial epithelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
dermis microvascular lymphatic vessel endothelial cell
2
duodenal mucosa
2
endocardial cell
2
endodermal cell
2
epithelial cell of prostate
2
esophagus
2
eye
2
fibroblast of breast
2
hepatocyte
2
lung microvascular endothelial cell
2
mesenchymal stem cell
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neural cell
2
neuroepithelial stem cell
2
neutrophil
2
pericyte cell
2
placental basal plate
2
prostate gland
2
regular ventricular cardiac myocyte
2
regulatory T cell
2
skeletal muscle myoblast
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
thoracic aorta
2
tongue
2
trophoblast
2
uterus
2
vagina
1
Ammon's horn
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta memory T cell
1
adipose tissue
1
amnion
1
amniotic epithelial cell
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
bipolar neuron
1
brain microvascular endothelial cell
1
brain pericyte
1
cerebellar cortex
1
cerebellum
1
cholangiocyte
1
choroid plexus epithelial cell
1
coronary artery
1
dendritic cell
1
ecto neural progenitor cell
1
ectodermal cell
1
effector memory CD4-positive, alpha-beta T cell
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
erythrocyte
1
femur
1
fibroblast of dermis
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
forelimb muscle
1
germinal matrix
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
hindlimb muscle
1
iris pigment epithelial cell
1
islet precursor cell
1
keratinocyte
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left leg bone
1
limb
1
mesendoderm
1
mid-neurogenesis radial glial cells
1
middle frontal gyrus
1
mononuclear cell
1
mucosa of stomach
1
myocyte
1
myofibroblast cell
1
myotube
1
neural progenitor cell
1
neuron
1
non-pigmented ciliary epithelial cell
1
osteoblast
1
pulmonary artery endothelial cell
Organ
1
brain
Life stage
1
adult
Date released
1
February, 2021
September, 2022
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_type!
cell line
month_released!
September, 2022
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR097UYA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Ammon's horn
Lab:
AMP-T2D consortium
Project:
AMP