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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
primary cell
2
cell line
Biosample term
36
heart
33
muscle of arm
30
lung
29
brain
29
stomach
28
muscle of back
27
large intestine
27
muscle of leg
26
left lung
26
placenta
25
kidney
25
small intestine
22
right lung
20
renal cortex interstitium
20
right kidney
20
thymus
19
renal pelvis
18
left kidney
16
adrenal gland
14
spinal cord
8
chorionic villus
8
muscle of trunk
7
H9
6
heart left ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
retina
6
right renal pelvis
5
WI38
5
neural progenitor cell
5
right renal cortex interstitium
4
22Rv1
4
SK-N-DZ
4
SK-N-SH
4
cardiac muscle cell
4
endodermal cell
4
eye
4
heart right ventricle
4
liver
4
mesodermal cell
4
spleen
4
tongue
4
trophoblast
3
HEK293
3
chorion membrane
3
limb
3
neural cell
3
testis
2
A673
2
CMK
2
DND-41
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM06990
2
GM08714
2
GM12864
2
GM12865
2
HUES48
2
HUES6
2
HUES64
2
HepG2
2
IMR-90
2
KOPT-K1
2
L1-S8
2
MG63
2
NAMALWA
2
NAMALWA cell
2
PC-9
2
Panc1
2
SJCRH30
2
SK-N-MC
2
UCSF-4
2
WERI-Rb-1
2
adipocyte
2
amnion
2
cardiac myoblast
2
cardiovascular progenitor cell
2
chorion
2
ectodermal cell
2
femur
2
germinal matrix
2
hematopoietic multipotent progenitor cell
2
hepatocyte
2
iPS DF 19.11
2
iPS DF 19.7
2
iPS DF 6.9
2
islet precursor cell
2
left cardiac atrium
2
mesenchymal stem cell
2
mesendoderm
2
neuroepithelial stem cell
2
neuron
2
neuronal stem cell
2
ovary
2
placental basal plate
2
psoas muscle
2
sigmoid colon
2
skeletal muscle tissue
2
smooth muscle cell
2
trophoblast cell
2
umbilical cord
1
AG04449
1
AG04449 cell
1
AG04450
1
AG04450 cell
1
BE(2)-C
1
BE2C
1
BJ
1
BJ cell
1
CWRU1
1
D721Med
1
ES-I3
1
GM03348
1
GM10248
1
GM10266
1
GM12801
1
GM12873
1
GM12874
1
GM12875
1
GM12891
1
GM12892
1
GM13976
1
GM13977
1
GM18507
1
GM20000
1
H1
1
H1-hESC
1
H7
1
H7-hESC
1
HCEC 1CT
1
HEK293T
1
HFF-Myc
1
HK-2
1
HK-2 cell
1
HTR-8/Svneo
1
Jurkat, Clone E6-1
1
L1-S8R
1
NCI-H460
1
NCI-H460 cell
1
NT2-D1 cell
1
NT2/D1
1
RKO
1
arm bone
1
cardiac mesoderm primordium
1
colon carcinoma
1
colon epithelial cell
1
ecto neural progenitor cell
1
embryonic facial prominence
1
endocrine pancreas
1
forelimb muscle
1
foreskin fibroblast
1
germinal center
1
hindlimb muscle
1
iPS DF 4.7
1
iPS DF 4.7 Cell Line
1
left leg bone
1
leg bone
1
lymphocyte
1
medulloblastoma
1
mid-neurogenesis radial glial cells
1
myotube
1
radial glial cell
1
right arm bone
1
skin of body
1
urinary bladder
1
urothelium cell line
Organ
2
penis
Life stage
1
newborn
1
postnatal
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
brain microvascular endothelial cell
biosample_type!
primary cell
relevant_life_stage!
adult
Showing 2 of 2 results
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Download
FileSet
DSR754CSP
released
Annotation file set
: Candidate regulatory elements for BSS00278 ELR from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR349RLP
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE ELR
Lab:
AMP-T2D consortium
Project:
AMP