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Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
3
chromatin state
2
target gene predictions
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
5
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
tissue
1
cell line
Biosample term
27
large intestine
10
sigmoid colon
8
transverse colon
7
K562
4
colonic mucosa
4
mucosa of rectum
4
muscle layer of colon
2
CMK
2
GM06990
2
GM12875
2
GM12878
2
HAP-1
2
HCT116
2
HL-60
2
HT-29
2
KBM-7
2
NAMALWA
2
NAMALWA cell
2
NB4
2
OCI-LY7
2
RPMI8226
2
SW480
1
Caco-2
1
GM12873
1
GM12874
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
GM19240
1
Karpas-422
1
LoVo
1
RKO
1
colon epithelial cell
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
Organ
5
intestine
5
large intestine
0
blood
Life stage
5
adult
Date released
3
February, 2021
2
September, 2022
Software used
3
encode-ccres
2
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_type!
primary cell
Showing 5 of 5 results
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Download
FileSet
DSR809VPE
released
Annotation file set
: Candidate regulatory elements for BSS00228 colonic mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR394QSN
released
Annotation file set
: Candidate regulatory elements for BSS00227 colonic mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR389KXN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE colonic mucosa
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR504AUN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE colonic mucosa
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR731FHY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Caco-2
Lab:
AMP-T2D consortium
Project:
AMP