Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
binding sites
3
candidate regulatory elements
2
accessible chromatin
2
histone modifications
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
27
large intestine
10
sigmoid colon
8
transverse colon
7
K562
4
colonic mucosa
4
mucosa of rectum
4
muscle layer of colon
4
peripheral blood mononuclear cell
2
CMK
2
DOHH2
2
GM06990
2
GM12875
2
GM12878
2
HAP-1
2
HCT116
2
HL-60
2
HT-29
2
KBM-7
2
NAMALWA
2
NAMALWA cell
2
NB4
2
OCI-LY7
2
RPMI8226
2
SU-DHL-6
2
SW480
1
Caco-2
1
GM12873
1
GM12874
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
GM19240
1
Karpas-422
1
LoVo
1
RKO
1
colon epithelial cell
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
Organ
2
blood
2
bodily fluid
1
intestine
1
large intestine
Life stage
3
unknown
Date released
2
February, 2021
1
September, 2022
Software used
2
encode-ccres
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
kidney
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR864YDM
released
Annotation file set
: Candidate regulatory elements for BSS00395 GM06990 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR837ODF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE RKO
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480OCS
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM06990
Lab:
AMP-T2D consortium
Project:
AMP