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Schema
Citing CMDGA
Clear Filters
Annotation type
13
gene expression
8
accessible chromatin
4
candidate regulatory elements
4
histone modifications
4
target gene predictions
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
snATAC-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
primary cell
Biosample term
13
liver
4
hepatocyte
2
HepG2
2
hepatic stellate cell
2
right lobe of liver
1
HuH-7
1
HuH-7.5
Disease term
1
liver disease
Organ
29
brain
4
epithelium
4
liver
2
embryo
Life stage
2
embryonic
1
adult
1
unknown
Date released
2
September, 2022
1
February, 2021
1
May, 2024
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
4
AMP
RFA
3
AMP
1
AMP2
Showing 4 of 4 results
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FileSet
DSR529HOM
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of hepatocyte derived from liver snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR201DTC
released
Annotation file set
: Candidate regulatory elements for BSS00556 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR654OFJ
released
Annotation file set
: Candidate regulatory elements for BSS00554 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR731RPD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE hepatocyte
Lab:
AMP-T2D consortium
Project:
AMP