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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
29
kidney
27
large intestine
20
renal cortex interstitium
20
right kidney
19
renal pelvis
18
left kidney
10
sigmoid colon
8
transverse colon
6
left renal cortex interstitium
6
left renal pelvis
6
right renal pelvis
5
right renal cortex interstitium
4
colonic mucosa
4
mucosa of rectum
4
muscle layer of colon
3
HEK293
3
kidney tubule cell
2
ACHN
2
Caki2
2
G401
2
HCT116
2
HT-29
2
RCC 7860
2
SW480
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
renal cortical epithelial cell
1
Caco-2
1
HEK293T
1
LoVo
1
RCC
1
RKO
1
colon epithelial cell
1
kidney capillary endothelial cell
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
1
renal cell carcinoma
Organ
1
intestine
1
large intestine
0
kidney
Life stage
1
adult
Date released
1
February, 2021
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
organ_slims!
placenta
Showing 1 of 1 results
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Download
FileSet
DSR739FCW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE LoVo
Lab:
AMP-T2D consortium
Project:
AMP