Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
39
stomach
36
heart
33
muscle of arm
32
lung
29
brain
29
kidney
28
muscle of back
28
small intestine
27
large intestine
27
muscle of leg
26
left lung
26
placenta
22
right lung
21
A549
20
common myeloid progenitor, CD34-positive
20
renal cortex interstitium
20
right kidney
19
renal pelvis
19
thymus
18
left kidney
17
hematopoietic multipotent progenitor cell
14
spinal cord
14
spleen
12
liver
11
B cell
11
foreskin keratinocyte
10
heart left ventricle
9
MCF-7
9
sigmoid colon
9
trophoblast cell
8
body of pancreas
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
thyroid gland
8
transverse colon
7
H9
7
K562
7
Peyer's patch
7
adipose tissue
7
foreskin fibroblast
7
neurosphere
7
testis
7
upper lobe of left lung
6
CD14-positive monocyte
6
CD8-positive, alpha-beta T cell
6
dermis blood vessel endothelial cell
6
endocrine pancreas
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
layer of hippocampus
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
natural killer cell
6
psoas muscle
6
retina
6
right renal pelvis
6
tibial nerve
5
CD4-positive, alpha-beta T cell
5
CD8-positive, alpha-beta memory T cell
5
HeLa-S3
5
breast epithelium
5
caudate nucleus
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
heart right ventricle
5
mononuclear cell
5
neural progenitor cell
5
omental fat pad
5
pancreas
5
parathyroid adenoma
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
4
T-helper 1 cell
4
angular gyrus
4
aorta
4
ascending aorta
4
cardiac muscle cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
esophagus
4
eye
4
fibroblast of breast
4
foreskin melanocyte
4
mesenchymal stem cell
4
mesodermal cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle tissue
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
vagina
3
CD4-positive, alpha-beta memory T cell
3
HEK293
3
LNCaP clone FGC
3
MCF 10A
3
T cell
3
T-helper 2 cell
3
T47D
3
cerebellum
3
coronary artery
3
endometrium adenocarcinoma
3
fibroblast of lung
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
limb
3
neural cell
3
regulatory T cell
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
urinary bladder
3
uterus
2
A172
2
ACC112
2
ACHN
2
AG10803
2
Ammon's horn
2
Brodmann (1909) area 46
2
C4-2B
2
Caki2
2
DOHH2
2
EH
2
EL
2
ELF-1
2
ELR
2
GM04503
2
GM04504
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HUES48
2
HUES6
2
HUES64
2
IMR-90
2
KBM-7
2
KMS-11
2
LHCN-M2
2
LNCAP
2
Loucy
2
M059J
2
MM.1S
2
NAMALWA cell
2
NB4
2
NCI-H929
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
RWPE2
2
SJSA1
2
SK-MEL-5
2
SK-N-DZ
2
SK-N-SH
2
SU-DHL-6
2
SW480
2
T-cell
2
UCSF-4
2
adipocyte
2
amnion
2
bipolar neuron
2
cardiac fibroblast
2
cardiac myoblast
2
cardiovascular progenitor cell
2
cerebellar cortex
2
chorion
2
chorion membrane
2
ectodermal cell
2
femur
2
fibroblast of cardiac tissue
2
fibroblast of dermis
2
frontal cortex
2
germinal matrix
2
globus pallidus
2
hepatocyte
Organ
3
mammary gland
Life stage
3
adult
Date released
3
February, 2021
Software used
3
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
adrenal gland
relevant_life_stage!
unknown
young adult
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR641CYG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MCF 10A
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR261OKT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MCF 10A
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR456VHQ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MCF 10A
Lab:
AMP-T2D consortium
Project:
AMP