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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
chromatin state
1
accessible chromatin
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
cell line
3
tissue
Biosample term
21
stomach
18
heart
17
lung
17
muscle of arm
15
kidney
15
muscle of back
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
small intestine
13
brain
13
left lung
12
placenta
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
9
B cell
9
hematopoietic multipotent progenitor cell
9
left kidney
9
spleen
9
thymus
8
CD4-positive, alpha-beta T cell
7
CD8-positive, alpha-beta T cell
7
foreskin keratinocyte
7
spinal cord
6
heart left ventricle
6
liver
6
natural killer cell
5
CD4-positive, alpha-beta memory T cell
5
cardiac muscle cell
5
foreskin fibroblast
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
4
CD14-positive monocyte
4
Peyer's patch
4
T-cell
4
adipocyte
4
body of pancreas
4
chorionic villus
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neuronal stem cell
4
neurosphere
4
ovary
4
peripheral blood mononuclear cell
4
right renal pelvis
4
testis
4
thyroid gland
4
transverse colon
4
trophoblast cell
4
upper lobe of left lung
3
T-helper 1 cell
3
breast epithelium
3
cardiac fibroblast
3
endocrine pancreas
3
endothelial cell
3
esophagus muscularis mucosa
3
fibroblast
3
fibroblast of lung
3
foreskin melanocyte
3
heart right ventricle
3
layer of hippocampus
3
macrophage
3
mammary epithelial cell
3
mast cell
3
mesodermal cell
3
omental fat pad
3
pancreas
3
parathyroid adenoma
3
psoas muscle
3
retina
3
right renal cortex interstitium
3
skeletal muscle tissue
3
smooth muscle cell
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
2
T-helper 17 cell
2
T-helper 2 cell
2
angular gyrus
2
bronchial epithelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
endocardial cell
2
endodermal cell
2
epithelial cell of prostate
2
esophagus
2
eye
2
fibroblast of breast
2
hepatocyte
2
mesenchymal stem cell
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neural cell
2
neuroepithelial stem cell
2
neutrophil
2
pericyte cell
2
placental basal plate
2
prostate gland
2
regular ventricular cardiac myocyte
2
regulatory T cell
2
skeletal muscle myoblast
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
tongue
2
trophoblast
2
uterus
2
vagina
1
Ammon's horn
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta memory T cell
1
adipose tissue
1
amnion
1
amniotic epithelial cell
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
bipolar neuron
1
brain pericyte
1
cerebellar cortex
1
cerebellum
1
cholangiocyte
1
dendritic cell
1
ecto neural progenitor cell
1
ectodermal cell
1
effector memory CD4-positive, alpha-beta T cell
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
erythrocyte
1
femur
1
fibroblast of dermis
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
forelimb muscle
1
germinal matrix
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
hindlimb muscle
1
iris pigment epithelial cell
1
islet precursor cell
1
keratinocyte
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left leg bone
1
limb
1
mesendoderm
1
mid-neurogenesis radial glial cells
1
middle frontal gyrus
1
mononuclear cell
1
mucosa of stomach
1
myocyte
1
myofibroblast cell
1
myotube
1
neural progenitor cell
1
neuron
1
non-pigmented ciliary epithelial cell
1
osteoblast
1
putamen
1
radial glial cell
1
rectal smooth muscle tissue
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
right arm bone
1
right atrium auricular region
1
right cardiac atrium
1
right lobe of liver
1
skeletal muscle cell
1
skeletal muscle satellite cell
1
stromal cell of bone marrow
1
umbilical cord
1
urinary bladder
Organ
3
kidney
Life stage
3
embryonic
Date released
3
February, 2021
Software used
3
encode-ccres
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
cell line
organ_slims!
vasculature
software_used.software.name!
r
Showing 3 of 3 results
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Download
FileSet
DSR108WDB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE right renal cortex interstitium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR441HNT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE right renal cortex interstitium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR744PMI
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE right renal cortex interstitium
Lab:
AMP-T2D consortium
Project:
AMP