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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
chromatin state
2
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
40
stomach
37
heart
33
lung
33
muscle of arm
29
brain
29
kidney
29
small intestine
28
adrenal gland
28
muscle of back
27
common myeloid progenitor, CD34-positive
27
large intestine
27
muscle of leg
26
left lung
26
placenta
22
right lung
21
A549
20
renal cortex interstitium
20
right kidney
20
thymus
19
renal pelvis
18
left kidney
17
B cell
15
spleen
14
CD4-positive, alpha-beta memory T cell
14
spinal cord
13
liver
11
foreskin keratinocyte
11
heart left ventricle
10
sigmoid colon
9
MCF-7
9
natural killer cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
8
body of pancreas
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
thyroid gland
8
transverse colon
7
CD8-positive, alpha-beta T cell
7
H9
7
K562
7
Peyer's patch
7
adipose tissue
7
endocrine pancreas
7
foreskin fibroblast
7
mononuclear cell
7
neurosphere
7
psoas muscle
7
testis
7
trophoblast cell
7
upper lobe of left lung
6
T-helper 1 cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
fibroblast of lung
6
heart right ventricle
6
layer of hippocampus
6
left renal cortex interstitium
6
left renal pelvis
lower leg skin
6
retina
6
right renal pelvis
6
skeletal muscle tissue
6
tibial nerve
5
HeLa-S3
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
breast epithelium
5
caudate nucleus
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
omental fat pad
5
pancreas
5
parathyroid adenoma
5
regulatory T cell
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
4
22Rv1
4
SK-N-DZ
4
SK-N-SH
4
T cell
4
T-cell
4
angular gyrus
4
aorta
4
ascending aorta
4
bronchial epithelial cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
epithelial cell of prostate
4
esophagus
4
eye
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle myoblast
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
vagina
3
HEK293
3
LNCaP clone FGC
3
MCF 10A
3
T47D
3
cardiac fibroblast
3
cerebellum
3
chorion membrane
3
coronary artery
3
endometrium adenocarcinoma
3
endothelial cell
3
endothelial cell of lymphatic vessel
3
fibroblast
3
fibroblast of cardiac tissue
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney tubule cell
3
limb
3
lung microvascular endothelial cell
3
macrophage
3
mammary epithelial cell
3
mammary gland epithelial cell
3
mast cell
3
naive T cell
3
pericyte cell
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
urinary bladder
3
uterus
2
A172
2
A673
2
ACC112
2
ACHN
2
AG10803
2
Ammon's horn
2
Brodmann (1909) area 46
2
C4-2B
2
CD1c-positive myeloid dendritic cell
2
CMK
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HUES48
2
HUES6
2
HUES64
2
HepG2
2
IMR-90
2
KBM-7
2
KMS-11
2
KOPT-K1
2
L1-S8
2
LHCN-M2
2
LNCAP
2
Loucy
2
M059J
2
MG63
2
MM.1S
Disease term
2
breast ductal adenocarcinoma
Organ
3
mammary gland
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
lower leg skin
biosample_type!
in vitro differentiated cells
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR606JCT
released
Annotation file set
: Candidate regulatory elements for BSS01705 T47D from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR045HHM
released
Annotation file set
: Candidate regulatory elements for BSS01699 T47D from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR037SAY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE T47D
Lab:
AMP-T2D consortium
Project:
AMP