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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
gene expression
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
21
A549
20
common myeloid progenitor, CD34-positive
17
hematopoietic multipotent progenitor cell
14
B cell
12
adrenal gland
11
spleen
11
stomach
9
MCF-7
9
liver
9
natural killer cell
8
body of pancreas
8
gastrocnemius medialis
8
sigmoid colon
8
thyroid gland
8
transverse colon
7
K562
7
Peyer's patch
7
adipose tissue
7
upper lobe of left lung
6
CD14-positive monocyte
6
CD8-positive, alpha-beta T cell
6
endocrine pancreas
6
esophagus squamous epithelium
6
layer of hippocampus
6
lower leg skin
6
ovary
6
tibial nerve
5
CD4-positive, alpha-beta T cell
5
CD8-positive, alpha-beta memory T cell
5
HeLa-S3
5
breast epithelium
5
caudate nucleus
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
heart left ventricle
5
mononuclear cell
5
omental fat pad
5
pancreas
5
parathyroid adenoma
5
psoas muscle
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
4
T-helper 1 cell
4
adipocyte
angular gyrus
4
aorta
4
ascending aorta
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
esophagus
4
fibroblast of breast
4
kidney
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle tissue
4
small intestine
4
stomach smooth muscle
4
testis
4
thoracic aorta
4
vagina
3
CD4-positive, alpha-beta memory T cell
3
LNCaP clone FGC
3
MCF 10A
3
T cell
3
T-helper 2 cell
3
T47D
3
cerebellum
3
coronary artery
3
dermis blood vessel endothelial cell
3
endometrium adenocarcinoma
3
endothelial cell
3
endothelial cell of lymphatic vessel
3
fibroblast
3
fibroblast of lung
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
lung
3
macrophage
3
mast cell
3
regulatory T cell
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
uterus
2
A172
2
ACC112
2
ACHN
2
AG10803
2
Ammon's horn
2
Brodmann (1909) area 46
2
C4-2B
2
Caki2
2
DOHH2
2
GM04503
2
GM04504
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
KBM-7
2
KMS-11
2
LHCN-M2
2
LNCAP
2
Loucy
2
M059J
2
MM.1S
2
NB4
2
NCI-H929
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
RWPE2
2
SJSA1
2
SK-MEL-5
2
SU-DHL-6
2
SW480
2
T-cell
2
bipolar neuron
2
cerebellar cortex
2
endocardial cell
2
fibroblast of dermis
2
frontal cortex
2
globus pallidus
2
heart right ventricle
2
hepatic stellate cell
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
2
kidney glomerular epithelial cell
2
mammary epithelial cell
2
mammary gland epithelial cell
2
mesenchymal stem cell
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of stomach
2
muscle cell
2
naive T cell
2
neuronal stem cell
2
pericyte cell
2
putamen
2
regular ventricular cardiac myocyte
2
right cardiac atrium
2
right lobe of liver
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
smooth muscle cell
2
subcutaneous adipose tissue
2
urinary bladder
1
8988T
1
AG08395 cell
1
AG08396 cell
1
AG09309
1
AG09309 cell
1
AG09319
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
COLO829
1
Caco-2
1
Caco-2 cell
1
GM10248
1
GM10266
1
GM12875
1
GM19238
1
GM19239
1
GM19240
1
HPDE6-E6E7
1
HuH-7
1
HuH-7.5
1
Ishikawa
1
KARPAS-422 cell
1
Karpas-422
1
LoVo
1
LoVo cell
1
NCI-H226
1
NCI-H226 cell
1
RCC
1
VCaP
1
VCaP cell
Organ
1
heart
Life stage
34
embryonic
1
adult
1
child
1
young adult
Date released
1
September, 2022
Software used
1
r
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
angular gyrus
luminal epithelial cell of mammary gland
Showing 1 of 1 results
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Download
FileSet
DSR853SVT
released
Annotation file set
: Candidate regulatory elements for BSS00514 heart from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP