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Citing CMDGA
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Annotation type
13
gene expression
8
accessible chromatin
4
histone modifications
3
target gene predictions
2
candidate regulatory elements
2
variant allelic effects
1
binding sites
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
primary cell
Biosample term
6
endothelial cell of umbilical vein
4
bronchial epithelial cell
4
epithelial cell of prostate
4
myoepithelial cell of mammary gland
3
endothelial cell
3
endothelial cell of lymphatic vessel
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
endocardial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hepatocyte
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
1
amniotic epithelial cell
1
cholangiocyte
1
epithelial cell of amnion
1
kidney capillary endothelial cell
1
luminal epithelial cell of mammary gland
Disease term
1
liver disease
Organ
2
epithelium
2
liver
Life stage
1
adult
1
unknown
Date released
1
May, 2024
1
September, 2022
Software used
1
r
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
RFA
1
AMP
1
AMP2
organ_slims!
bone element
skin of body
Showing 2 of 2 results
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Download
FileSet
DSR529HOM
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of hepatocyte derived from liver snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR654OFJ
released
Annotation file set
: Candidate regulatory elements for BSS00554 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP