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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
chromatin state
2
target gene predictions
1
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
39
stomach
36
heart
33
muscle of arm
32
lung
29
brain
29
kidney
28
adrenal gland
28
muscle of back
28
small intestine
27
large intestine
27
muscle of leg
26
left lung
26
placenta
22
right lung
21
A549
20
common myeloid progenitor, CD34-positive
20
renal cortex interstitium
20
right kidney
19
renal pelvis
19
thymus
18
left kidney
17
hematopoietic multipotent progenitor cell
14
spinal cord
14
spleen
13
liver
11
B cell
11
foreskin keratinocyte
10
heart left ventricle
9
MCF-7
9
sigmoid colon
9
trophoblast cell
8
body of pancreas
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
thyroid gland
8
transverse colon
7
H9
7
K562
7
Peyer's patch
7
adipose tissue
7
foreskin fibroblast
7
neurosphere
7
testis
7
upper lobe of left lung
CD14-positive monocyte
6
CD8-positive, alpha-beta T cell
6
dermis blood vessel endothelial cell
6
endocrine pancreas
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
layer of hippocampus
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
natural killer cell
6
psoas muscle
6
retina
6
right renal pelvis
6
tibial nerve
5
CD4-positive, alpha-beta T cell
5
CD8-positive, alpha-beta memory T cell
5
HeLa-S3
5
breast epithelium
5
caudate nucleus
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
heart right ventricle
5
mononuclear cell
5
neural progenitor cell
5
omental fat pad
5
pancreas
5
parathyroid adenoma
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
4
T-helper 1 cell
4
angular gyrus
4
aorta
4
ascending aorta
4
cardiac muscle cell
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
esophagus
4
eye
4
fibroblast of breast
4
foreskin melanocyte
4
mesenchymal stem cell
4
mesodermal cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle tissue
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
vagina
3
CD4-positive, alpha-beta memory T cell
3
HEK293
3
LNCaP clone FGC
3
MCF 10A
3
T cell
3
T-helper 2 cell
3
T47D
3
cerebellum
3
coronary artery
3
endometrium adenocarcinoma
3
fibroblast of lung
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
limb
3
neural cell
3
regulatory T cell
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
urinary bladder
3
uterus
2
A172
2
ACC112
2
ACHN
2
AG10803
2
Ammon's horn
2
Brodmann (1909) area 46
2
C4-2B
2
Caki2
2
DOHH2
2
EH
2
EL
2
ELF-1
2
ELR
2
GM04503
2
GM04504
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HUES48
2
HUES6
2
HUES64
2
IMR-90
2
KBM-7
2
KMS-11
2
LHCN-M2
2
LNCAP
2
Loucy
2
M059J
2
MM.1S
2
NAMALWA
2
NB4
2
NCI-H929
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
RWPE2
2
SJSA1
2
SK-MEL-5
2
SK-N-DZ
2
SK-N-SH
2
SU-DHL-6
2
SW480
2
T-cell
2
UCSF-4
2
adipocyte
2
amnion
2
bipolar neuron
2
cardiac fibroblast
2
cardiac myoblast
2
cardiovascular progenitor cell
2
cerebellar cortex
2
chorion
2
chorion membrane
2
ectodermal cell
2
femur
2
fibroblast of cardiac tissue
2
fibroblast of dermis
2
frontal cortex
2
germinal matrix
2
globus pallidus
Organ
3
limb
Life stage
3
embryonic
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
CD14-positive monocyte
relevant_life_stage!
child
unknown
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR999BYP
released
Annotation file set
: Candidate regulatory elements for BSS01157 limb from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR459JPT
released
Annotation file set
: Candidate regulatory elements for BSS01156 limb from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR437VXJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE limb
Lab:
AMP-T2D consortium
Project:
AMP