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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
2
candidate regulatory elements
2
chromatin state
2
eQTL
2
gene expression
2
target gene predictions
2
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
19
heart
19
stomach
16
brain
16
muscle of arm
15
small intestine
14
adrenal gland
14
kidney
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
muscle of back
13
muscle of leg
11
thymus
10
hematopoietic multipotent progenitor cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
B cell
7
CD8-positive, alpha-beta memory T cell
7
liver
7
spinal cord
6
K562
6
adipose tissue
6
mononuclear cell
6
spleen
5
MCF-7
5
heart left ventricle
5
sigmoid colon
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
body of pancreas
4
chorionic villus
4
endocrine pancreas
4
foreskin keratinocyte
4
gastrocnemius medialis
4
muscle of trunk
4
neural progenitor cell
4
ovary
4
psoas muscle
4
thyroid gland
4
transverse colon
3
HeLa-S3
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
caudate nucleus
3
chorion membrane
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
heart right ventricle
3
immortal human breast epithelial cell line cell
3
layer of hippocampus
3
mammary gland epithelial cell
3
naive T cell
3
natural killer cell
3
neurosphere
3
regulatory T cell
3
retina
3
skeletal muscle tissue
3
testis
tibial nerve
2
22Rv1
2
Brodmann (1909) area 46
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipocyte
2
angular gyrus
2
aorta
2
ascending aorta
2
breast epithelium
2
bronchial epithelial cell
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
endothelial cell of umbilical vein
2
epithelial cell of prostate
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
frontal cortex
2
hepatocyte
2
keratinocyte
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mesenchymal stem cell
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
omental fat pad
2
pancreas
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skin fibroblast
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM18507
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H1-hESC
1
H4
1
H54
1
H7-hESC
1
H9
1
HAP-1
1
HCT116
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HepG2
Organ
lung
2
heart
Life stage
2
adult
Date released
2
September, 2022
Software used
2
r
encode-ccres
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
tibial nerve
organ_slims!
lung
software_used.software.name!
encode-ccres
Showing 2 of 2 results
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Download
FileSet
DSR275RAL
released
Annotation file set
: Candidate regulatory elements for BSS01507 right atrium auricular region from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR208AFS
released
Annotation file set
: Candidate regulatory elements for BSS01506 right atrium auricular region from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP