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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
2
chromatin state
2
target gene predictions
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
40
stomach
37
heart
33
lung
33
muscle of arm
29
brain
29
kidney
28
adrenal gland
28
muscle of back
27
large intestine
27
muscle of leg
26
left lung
26
placenta
22
right lung
21
A549
20
common myeloid progenitor, CD34-positive
20
renal cortex interstitium
20
right kidney
20
thymus
19
renal pelvis
18
left kidney
17
hematopoietic multipotent progenitor cell
15
spleen
14
B cell
14
spinal cord
13
liver
11
foreskin keratinocyte
11
heart left ventricle
10
sigmoid colon
9
MCF-7
9
natural killer cell
9
trophoblast cell
8
body of pancreas
8
chorionic villus
8
gastrocnemius medialis
8
muscle of trunk
8
ovary
8
thyroid gland
8
transverse colon
7
H9
7
K562
7
Peyer's patch
7
adipose tissue
7
foreskin fibroblast
7
neurosphere
7
psoas muscle
7
testis
7
upper lobe of left lung
6
CD14-positive monocyte
6
CD8-positive, alpha-beta T cell
6
dermis blood vessel endothelial cell
6
endocrine pancreas
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
6
heart right ventricle
6
layer of hippocampus
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
retina
6
right renal pelvis
6
tibial nerve
5
CD4-positive, alpha-beta T cell
5
CD8-positive, alpha-beta memory T cell
5
HeLa-S3
5
breast epithelium
5
caudate nucleus
5
esophagus muscularis mucosa
5
gastroesophageal sphincter
5
mononuclear cell
5
neural progenitor cell
5
omental fat pad
5
pancreas
5
parathyroid adenoma
5
right renal cortex interstitium
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
4
SK-N-DZ
4
SK-N-SH
4
T-helper 1 cell
4
adipocyte
4
angular gyrus
4
aorta
4
ascending aorta
4
cardiac muscle cell
4
cingulate gyrus
4
colonic mucosa
4
endodermal cell
4
esophagus
4
eye
4
fibroblast of breast
4
foreskin melanocyte
4
mesenchymal stem cell
4
mesodermal cell
4
mucosa of rectum
4
muscle layer of colon
4
myoepithelial cell of mammary gland
4
neuronal stem cell
4
peripheral blood mononuclear cell
4
prostate gland
4
skeletal muscle tissue
4
smooth muscle cell
4
stomach smooth muscle
4
thoracic aorta
4
tongue
4
trophoblast
4
vagina
3
CD4-positive, alpha-beta memory T cell
3
HEK293
3
LNCaP clone FGC
3
MCF 10A
3
T cell
3
T-helper 2 cell
3
T47D
3
cerebellum
3
coronary artery
3
endometrium adenocarcinoma
3
endothelial cell
3
endothelial cell of lymphatic vessel
3
fibroblast
3
fibroblast of lung
3
hepatocyte
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
limb
3
macrophage
3
mast cell
3
neural cell
3
regulatory T cell
3
right atrium auricular region
3
suprapubic skin
3
tibial artery
3
urinary bladder
3
uterus
2
A172
2
A673
2
ACC112
2
ACHN
2
AG10803
2
Ammon's horn
2
Brodmann (1909) area 46
2
C4-2B
2
CMK
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM04503
2
GM04504
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HUES48
2
HUES6
2
HUES64
2
HepG2
2
IMR-90
2
KBM-7
2
KMS-11
2
LHCN-M2
2
LNCAP
2
Loucy
2
M059J
2
MG63
2
MM.1S
2
NAMALWA
2
NAMALWA cell
2
NB4
2
NCI-H929
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
RWPE2
2
SJCRH30
2
SJSA1
2
SK-MEL-5
2
SK-N-MC
2
SU-DHL-6
2
SW480
2
T-cell
2
UCSF-4
Organ
4
intestine
4
large intestine
Life stage
4
adult
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
small intestine
relevant_life_stage!
unknown
Showing 4 of 4 results
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Download
FileSet
DSR517BWR
released
Annotation file set
: Candidate regulatory elements for BSS01286 muscle layer of colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR063HGJ
released
Annotation file set
: Candidate regulatory elements for BSS01285 muscle layer of colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR023HHN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE muscle layer of colon
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR475BBT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE muscle layer of colon
Lab:
AMP-T2D consortium
Project:
AMP