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Schema
Citing CMDGA
Clear Filters
Annotation type
16
histone modifications
10
accessible chromatin
7
gene expression
5
candidate regulatory elements
5
target gene predictions
4
binding sites
4
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
5
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
27
common myeloid progenitor, CD34-positive
21
A549
19
hematopoietic multipotent progenitor cell
14
B cell
14
CD4-positive, alpha-beta memory T cell
11
foreskin keratinocyte
9
MCF-7
9
trophoblast cell
8
CD14-positive monocyte
8
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta memory T cell
7
CD8-positive, alpha-beta T cell
7
H9
7
K562
7
foreskin fibroblast
7
mononuclear cell
7
neurosphere
6
T-helper 1 cell
6
cardiac muscle cell
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
fibroblast of lung
6
natural killer cell
5
HeLa-S3
5
T-helper 17 cell
5
T-helper 2 cell
5
WI38
5
neural progenitor cell
5
regulatory T cell
4
22Rv1
4
SK-N-DZ
4
SK-N-SH
4
T cell
4
T-cell
4
adipocyte
4
bronchial epithelial cell
4
endodermal cell
4
epithelial cell of prostate
4
fibroblast of breast
4
fibroblast of dermis
4
foreskin melanocyte
4
mesenchymal stem cell
4
mesodermal cell
4
myoepithelial cell of mammary gland
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
peripheral blood mononuclear cell
4
skeletal muscle myoblast
3
HEK293
3
LNCaP clone FGC
3
MCF 10A
3
T47D
3
cardiac fibroblast
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
hepatocyte
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
3
naive T cell
3
neural cell
2
A172
2
A673
2
ACC112
2
ACHN
2
AG10803
2
C4-2B
2
CD1c-positive myeloid dendritic cell
2
CMK
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HUES48
2
HUES6
2
HUES64
2
HepG2
2
IMR-90
2
KBM-7
2
KMS-11
2
KOPT-K1
2
L1-S8
2
LHCN-M2
2
LNCAP
2
Loucy
2
M059J
2
MG63
2
MM.1S
2
NAMALWA
2
NAMALWA cell
2
NB4
2
NCI-H929
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
PC-9
2
Panc1
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
RWPE2
2
SJCRH30
2
SJSA1
2
SK-MEL-5
2
SK-N-MC
2
SU-DHL-6
2
SW480
2
UCSF-4
2
WERI-Rb-1
2
astrocyte
2
astrocyte of the cerebellum
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
bipolar neuron
2
brain microvascular endothelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
ectodermal cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iPS DF 19.11
2
iPS DF 19.7
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
2
iris pigment epithelial cell
2
islet precursor cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
mesendoderm
2
muscle cell
2
neuroepithelial stem cell
2
neuron
2
neuronal stem cell
2
non-pigmented ciliary epithelial cell
2
osteoblast
2
pulmonary artery endothelial cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
skin fibroblast
smooth muscle cell
2
smooth muscle cell of the brain vasculature
2
stromal cell of bone marrow
1
8988T
1
AG04449
1
AG04449 cell
1
AG04450
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309
1
AG09309 cell
Life stage
5
embryonic
Date released
4
September, 2022
1
February, 2021
Software used
4
r
1
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
astrocyte of the hippocampus
smooth muscle cell
biosample_type!
tissue
organ_slims!
small intestine
Showing 5 of 5 results
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Download
FileSet
DSR114CAK
released
Annotation file set
: Candidate regulatory elements for BSS01372 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR794AQT
released
Annotation file set
: Candidate regulatory elements for BSS01371 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR064BJU
released
Annotation file set
: Candidate regulatory elements for BSS01370 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR913FYZ
released
Annotation file set
: Candidate regulatory elements for BSS00272 neural progenitor cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR859OBP
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE neural progenitor cell
Lab:
AMP-T2D consortium
Project:
AMP