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Schema
Citing CMDGA
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Annotation type
10
accessible chromatin
10
target gene predictions
3
candidate regulatory elements
1
chromatin state
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
7
adipose tissue
6
adipocyte
6
fibroblast of lung
6
foreskin fibroblast
5
omental fat pad
5
subcutaneous abdominal adipose tissue
4
fibroblast of dermis
4
mesenchymal stem cell
3
cardiac fibroblast
3
fibroblast
3
fibroblast of cardiac tissue
3
pericyte cell
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
hepatic stellate cell
2
osteoblast
2
skin fibroblast
2
stromal cell of bone marrow
2
subcutaneous adipose tissue
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
brain pericyte
1
fibroblast of skin of abdomen
Disease term
2
heart failure
Organ
3
connective tissue
Life stage
2
adult
1
unknown
Date released
2
May, 2024
1
September, 2022
Software used
1
r
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
3
AMP
RFA
2
AMP2
1
AMP
biosample_type!
cell line
organ_slims!
artery
Showing 3 of 3 results
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Download
FileSet
DSR167PUF
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of pericyte cell derived from RV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR504QNL
released
Annotation file set
: Candidate cis-Regulatory Elements (cCREs) of pericyte cell derived from LV snATAC-seq
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR379VYT
released
Annotation file set
: Candidate regulatory elements for BSS00144 pericyte cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP